RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
CUL1-201ENST00000325222 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
CUL1-201ENST00000325222 CEP57L1Q8IYX8 460 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 FHOD1Q9Y613 1164 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
CUL1-201ENST00000325222 SLIT1O75093 1534 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
CUL1-201ENST00000325222 FANCGO15287 622 aa17■□□□□ 0.31
CUL1-201ENST00000325222 RFX5P48382 616 aaPredicted RBP17■□□□□ 0.31
CUL1-201ENST00000325222 NDUFA8P51970 172 aa17■□□□□ 0.31
CUL1-201ENST00000325222 TNNI3KQ59H18 835 aa17■□□□□ 0.31
CUL1-201ENST00000325222 ZFP91Q96JP5 570 aaPredicted RBP17■□□□□ 0.31
CUL1-201ENST00000325222 LLPHQ9BRT6 129 aaKnown RBP17■□□□□ 0.31
CUL1-201ENST00000325222 FPGT-TNNI3KV9GXZ4 949 aa17■□□□□ 0.31
CUL1-201ENST00000325222 OTUD7BQ6GQQ9 843 aa17■□□□□ 0.31
CUL1-201ENST00000325222 CHST3Q7LGC8 479 aa17■□□□□ 0.31
CUL1-201ENST00000325222 IFNKQ9P0W0 207 aa17■□□□□ 0.31
CUL1-201ENST00000325222 LAMA4Q16363 1823 aa17■□□□□ 0.31
CUL1-201ENST00000325222 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
CUL1-201ENST00000325222 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
CUL1-201ENST00000325222 TMC6Q7Z403 805 aa17■□□□□ 0.31
CUL1-201ENST00000325222 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
CUL1-201ENST00000325222 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
CUL1-201ENST00000325222 FDPSP14324 419 aaKnown RBP16.99■□□□□ 0.31
CUL1-201ENST00000325222 CLCN6P51797 869 aa16.99■□□□□ 0.31
CUL1-201ENST00000325222 EXOSC10Q01780 885 aaKnown RBP16.99■□□□□ 0.31
CUL1-201ENST00000325222 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
CUL1-201ENST00000325222 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
CUL1-201ENST00000325222 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
CUL1-201ENST00000325222 DDX21Q9NR30 783 aaKnown RBP eCLIP16.99■□□□□ 0.31
CUL1-201ENST00000325222 ABCC6O95255 1503 aa16.99■□□□□ 0.31
CUL1-201ENST00000325222 GCKRQ14397 625 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
CUL1-201ENST00000325222 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 BIN1O00499 593 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 GSDMDP57764 484 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 NCAPHQ15003 741 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 CLIC4Q9Y696 253 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 NFAT5O94916 1531 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 AGXT2Q9BYV1 514 aa16.98■□□□□ 0.31
CUL1-201ENST00000325222 SMC2O95347 1197 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 MYL6BP14649 208 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 PLA2G4AP47712 749 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
CUL1-201ENST00000325222 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 MRPS27Q92552 414 aaKnown RBP16.97■□□□□ 0.31
CUL1-201ENST00000325222 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 KCNA6P17658 529 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 PDIA3P30101 505 aaKnown RBP16.97■□□□□ 0.31
CUL1-201ENST00000325222 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
CUL1-201ENST00000325222 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 MYD88Q99836 296 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 HAUS7Q99871 368 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 SDF4Q9BRK5 362 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 HSD3B7Q9H2F3 369 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 IMPACTQ9P2X3 320 aa16.97■□□□□ 0.31
CUL1-201ENST00000325222 GJB4Q9NTQ9 266 aa16.96■□□□□ 0.31
CUL1-201ENST00000325222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.96■□□□□ 0.316e-7■■■□□ 15.1
CUL1-201ENST00000325222 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
CUL1-201ENST00000325222 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
CUL1-201ENST00000325222 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 CARMIL3Q8ND23 1372 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 PNMA6AP0CW24 399 aaPredicted RBP16.95■□□□□ 0.3
CUL1-201ENST00000325222 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 ADALQ6DHV7 355 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 PSDA5PKW4 1024 aaPredicted RBP16.95■□□□□ 0.3
CUL1-201ENST00000325222 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
CUL1-201ENST00000325222 ATP1A3P13637 1013 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 ARHGAP29Q52LW3 1261 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 ISM2Q6H9L7 571 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 EID1Q9Y6B2 187 aa16.95■□□□□ 0.3
CUL1-201ENST00000325222 E7EWF7 191 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 KIF2AO00139 706 aaPredicted RBP16.94■□□□□ 0.3
CUL1-201ENST00000325222 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 DPF2Q92785 391 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 NAT10Q9H0A0 1025 aaKnown RBP16.94■□□□□ 0.3
CUL1-201ENST00000325222 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
CUL1-201ENST00000325222 C1orf141Q5JVX7 400 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 TTLL5Q6EMB2 1281 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 TRIM65Q6PJ69 517 aa16.94■□□□□ 0.3
CUL1-201ENST00000325222 ZRANB2O95218 330 aaKnown RBP eCLIP16.93■□□□□ 0.3
CUL1-201ENST00000325222 BMS1Q14692 1282 aaKnown RBP16.93■□□□□ 0.3
CUL1-201ENST00000325222 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
CUL1-201ENST00000325222 COPS6Q7L5N1 327 aa16.93■□□□□ 0.3
CUL1-201ENST00000325222 NOL10Q9BSC4 688 aaKnown RBP16.93■□□□□ 0.3
CUL1-201ENST00000325222 EPC1Q9H2F5 836 aa16.93■□□□□ 0.3
CUL1-201ENST00000325222 SFPQP23246 707 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■□□□□ 8.4
CUL1-201ENST00000325222 KBTBD3Q8NAB2 608 aa16.93■□□□□ 0.3
CUL1-201ENST00000325222 CCDC150Q8NCX0 1101 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms