RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 CNGA1P29973 690 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
FARP1-201ENST00000319562 CRCPO75575 148 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 ZNF644Q9H582 1327 aaPredicted RBP13.72□□□□□ -0.21
FARP1-201ENST00000319562 ZBTB43O43298 467 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 UBXN1Q04323 297 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 EHBP1L1Q8N3D4 1523 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 ARHGAP25P42331 645 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 SDCCAG8Q86SQ7 713 aaPredicted RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 CNGA4Q8IV77 575 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 STMN1P16949 149 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 CLNS1AP54105 237 aaKnown RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 IFIT1BQ5T764 474 aaKnown RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 CROCCP2Q86T23 111 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 USP48Q86UV5 1035 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 ALG1Q9BT22 464 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 SEL1L2Q5TEA6 688 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 GKAP1Q5VSY0 366 aaPredicted RBP13.71□□□□□ -0.21
FARP1-201ENST00000319562 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 GSTO1P78417 241 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 ARID5AQ03989 594 aa13.71□□□□□ -0.21
FARP1-201ENST00000319562 GEN1Q17RS7 908 aa13.71□□□□□ -0.22
FARP1-201ENST00000319562 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.22
FARP1-201ENST00000319562 ASIC1P78348 528 aa13.71□□□□□ -0.22
FARP1-201ENST00000319562 MAP7Q14244 749 aa13.71□□□□□ -0.22
FARP1-201ENST00000319562 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.22
FARP1-201ENST00000319562 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.22
FARP1-201ENST00000319562 FAM13AO94988 1023 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 PFDN4Q9NQP4 134 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 RAB3IPQ96QF0 476 aaPredicted RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 INPP5BP32019 993 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TAOK1Q7L7X3 1001 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 UTP11Q9Y3A2 253 aaKnown RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 RTN1Q16799 776 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 FAM69CQ0P6D2 419 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TRPC3Q13507 836 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 SMARCA4P51532 1647 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TYRO3Q06418 890 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TTC22Q5TAA0 569 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 TMX3Q96JJ7 454 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
FARP1-201ENST00000319562 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
FARP1-201ENST00000319562 TRMT112Q9UI30 125 aaKnown RBP13.69□□□□□ -0.22
FARP1-201ENST00000319562 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 HSPA1LP34931 641 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 CALML3P27482 149 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 CCDC170Q8IYT3 715 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 LZTFL1Q9NQ48 299 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 NDUFAB1O14561 156 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 CYB5RLQ6IPT4 315 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
FARP1-201ENST00000319562 GJC1P36383 396 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 MCM10Q7L590 875 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 TRMT1LQ7Z2T5 733 aaKnown RBP13.69□□□□□ -0.22
FARP1-201ENST00000319562 ESR2Q92731 530 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
FARP1-201ENST00000319562 C6orf50Q9HD87 102 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 DNAJC25Q9H1X3 360 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 MGEA5O60502 916 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
FARP1-201ENST00000319562 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 ARHGEF2Q92974 986 aaKnown RBP13.68□□□□□ -0.22
FARP1-201ENST00000319562 BCAP29Q9UHQ4 241 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 PPP2R3AQ06190 1150 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 KLF18A0A0U1RQI7 1052 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 GIPC1O14908 333 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 RASSF2P50749 326 aa13.68□□□□□ -0.22
FARP1-201ENST00000319562 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms