RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 C8orf34Q49A92 452 aa20.56■□□□□ 0.88
MINDY2-201ENST00000316848 ABCC10Q5T3U5 1492 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 SKILP12757 684 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 CREB3L3Q68CJ9 461 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 TRAPPC8Q9Y2L5 1435 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 GTPBP4Q9BZE4 634 aaKnown RBP20.55■□□□□ 0.88
MINDY2-201ENST00000316848 MAPKBP1O60336 1514 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 IP6K1Q92551 441 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 BCCIPQ9P287 314 aaKnown RBP eCLIP20.55■□□□□ 0.88
MINDY2-201ENST00000316848 ACTN2P35609 894 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 ASIC1P78348 528 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 CBX1P83916 185 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 PLEKHM2Q8IWE5 1019 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 TBC1D5Q92609 795 aa20.55■□□□□ 0.88
MINDY2-201ENST00000316848 MICALCLQ6ZW33 695 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 BICD1Q96G01 975 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 EIF2AK4Q9P2K8 1649 aaKnown RBP20.54■□□□□ 0.88
MINDY2-201ENST00000316848 TRPM2O94759 1503 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 AK2P54819 239 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 KRT24Q2M2I5 525 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 CCDC175P0C221 793 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 CKAP4Q07065 602 aaKnown RBP20.54■□□□□ 0.88
MINDY2-201ENST00000316848 FERMT1Q9BQL6 677 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 GOLGA6L10A0A0M3HER8 536 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 KRT13P13646 458 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 BMS1Q14692 1282 aaKnown RBP20.54■□□□□ 0.88
MINDY2-201ENST00000316848 CCDC186Q7Z3E2 898 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
MINDY2-201ENST00000316848 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
MINDY2-201ENST00000316848 POLR3GO15318 223 aaPredicted RBP20.53■□□□□ 0.88
MINDY2-201ENST00000316848 CHMLP26374 656 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 PUF60Q9UHX1 559 aaKnown RBP20.53■□□□□ 0.88
MINDY2-201ENST00000316848 WDR7Q9Y4E6 1490 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 FSD2A1L4K1 749 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 BRAPQ7Z569 592 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
MINDY2-201ENST00000316848 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
MINDY2-201ENST00000316848 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 FAM107BQ9H098 131 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 MCM9Q9NXL9 1143 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 TNNQ9UQP3 1299 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 ABCC1P33527 1531 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 TUBB4AP04350 444 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 KIAA0753Q2KHM9 967 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 KRT79Q5XKE5 535 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 ANKRD2Q9GZV1 360 aa20.53■□□□□ 0.88
MINDY2-201ENST00000316848 UBAP1LF5GYI3 381 aa20.52■□□□□ 0.88
MINDY2-201ENST00000316848 HOXC9P31274 260 aa20.52■□□□□ 0.88
MINDY2-201ENST00000316848 TFCP2Q12800 502 aa20.52■□□□□ 0.88
MINDY2-201ENST00000316848 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
MINDY2-201ENST00000316848 DNAJC25Q9H1X3 360 aa20.52■□□□□ 0.88
MINDY2-201ENST00000316848 AOPEPQ8N6M6 819 aa20.52■□□□□ 0.88
MINDY2-201ENST00000316848 RTL1A6NKG5 1358 aa20.52■□□□□ 0.87
MINDY2-201ENST00000316848 PICALMQ13492 652 aa20.52■□□□□ 0.87
MINDY2-201ENST00000316848 DYNC1I1O14576 645 aa20.51■□□□□ 0.87
MINDY2-201ENST00000316848 GNA11P29992 359 aa20.51■□□□□ 0.87
MINDY2-201ENST00000316848 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
MINDY2-201ENST00000316848 HELBQ8NG08 1087 aaPredicted RBP20.51■□□□□ 0.87
MINDY2-201ENST00000316848 BBXQ8WY36 941 aaPredicted RBP20.51■□□□□ 0.87
MINDY2-201ENST00000316848 DHX58Q96C10 678 aa20.51■□□□□ 0.87
MINDY2-201ENST00000316848 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
MINDY2-201ENST00000316848 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 HOXB7P09629 217 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 MAGEB6Q8N7X4 407 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 CCDC97Q96F63 343 aaPredicted RBP20.5■□□□□ 0.87
MINDY2-201ENST00000316848 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 DDX12PQ92771 950 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 APOBRQ0VD83 1088 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 ATL3Q6DD88 541 aa20.5■□□□□ 0.87
MINDY2-201ENST00000316848 PAXIP1Q6ZW49 1069 aaPredicted RBP20.49■□□□□ 0.87
MINDY2-201ENST00000316848 TYRO3Q06418 890 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 MAATS1Q7Z4T9 603 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 KCNA6P17658 529 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 NOLC1Q14978 699 aaKnown RBP eCLIP20.49■□□□□ 0.87
MINDY2-201ENST00000316848 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 CTAGE15A4D2H0 777 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
MINDY2-201ENST00000316848 CTAGE8P0CG41 777 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 KRT2P35908 639 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 PRPHP41219 470 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 HSP90AA4PQ58FG1 418 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 CTAGE6Q86UF2 777 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 CTAGE4Q8IX94 777 aa20.49■□□□□ 0.87
MINDY2-201ENST00000316848 STAMBPO95630 424 aa20.48■□□□□ 0.87
MINDY2-201ENST00000316848 LMOD1P29536 600 aaPredicted RBP20.48■□□□□ 0.87
MINDY2-201ENST00000316848 BICC1Q9H694 974 aaKnown RBP20.48■□□□□ 0.87
MINDY2-201ENST00000316848 CALCOCO1Q9P1Z2 691 aa20.48■□□□□ 0.87
MINDY2-201ENST00000316848 DNAI1Q9UI46 699 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms