RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 NBR1Q14596 966 aa20.07■□□□□ 0.8
CLCF1-201ENST00000312438 CCDC24Q8N4L8 307 aa20.07■□□□□ 0.8
CLCF1-201ENST00000312438 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
CLCF1-201ENST00000312438 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLCF1-201ENST00000312438 SNAP23O00161 211 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 ZSCAN25Q6NSZ9 544 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 HMG20BQ9P0W2 317 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 CIZ1Q9ULV3 898 aaPredicted RBP20.06■□□□□ 0.8
CLCF1-201ENST00000312438 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
CLCF1-201ENST00000312438 SLC27A2O14975 620 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 TSGA10IPQ3SY00 556 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 PI16Q6UXB8 463 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 CCDC129Q6ZRS4 1044 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
CLCF1-201ENST00000312438 CYP2E1P05181 493 aaPredicted RBP20.05■□□□□ 0.8
CLCF1-201ENST00000312438 SPEF2Q9C093 1822 aa20.05■□□□□ 0.8
CLCF1-201ENST00000312438 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
CLCF1-201ENST00000312438 SERPINB2P05120 415 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 PSMA5P28066 241 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 PRR5LQ6MZQ0 368 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 SPATA5Q8NB90 893 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 FBXO41Q8TF61 875 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 AKT1S1Q96B36 256 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 DSCC1Q9BVC3 393 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 ZSWIM6Q9HCJ5 1215 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 NFKBIBQ15653 356 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 POTEAQ6S8J7 498 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 ANKRD2Q9GZV1 360 aa20.04■□□□□ 0.8
CLCF1-201ENST00000312438 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
CLCF1-201ENST00000312438 BCAMP50895 628 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 FLAD1Q8NFF5 587 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 APPBP2Q92624 585 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 OSBP2Q969R2 916 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 TMX3Q96JJ7 454 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
CLCF1-201ENST00000312438 CWC22Q9HCG8 908 aaKnown RBP20.03■□□□□ 0.8
CLCF1-201ENST00000312438 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
CLCF1-201ENST00000312438 ST5P78524 1137 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 WASHC4Q2M389 1173 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 TTC14Q96N46 770 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 MAST3O60307 1309 aa20.02■□□□□ 0.8
CLCF1-201ENST00000312438 RASGRF1Q13972 1273 aa20.02■□□□□ 0.79
CLCF1-201ENST00000312438 KRT32Q14532 448 aa20.02■□□□□ 0.79
CLCF1-201ENST00000312438 PIH1D3Q9NQM4 214 aaKnown RBP20.02■□□□□ 0.79
CLCF1-201ENST00000312438 GNL3LQ9NVN8 582 aaKnown RBP20.02■□□□□ 0.79
CLCF1-201ENST00000312438 C4AP0C0L4 1744 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 HSPD1P10809 573 aaKnown RBP20.01■□□□□ 0.79
CLCF1-201ENST00000312438 UBE3CQ15386 1083 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 ZNF827Q17R98 1081 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 CAVIN4Q5BKX8 364 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 SLC9C2Q5TAH2 1124 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 RUFY3Q7L099 469 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 NLGN1Q8N2Q7 840 aa20.01■□□□□ 0.79
CLCF1-201ENST00000312438 M0R2C6 588 aa20■□□□□ 0.79
CLCF1-201ENST00000312438 ADD2P35612 726 aa20■□□□□ 0.79
CLCF1-201ENST00000312438 GRAPQ13588 217 aa20■□□□□ 0.79
CLCF1-201ENST00000312438 GRAPLQ8TC17 118 aaPredicted RBP20■□□□□ 0.79
CLCF1-201ENST00000312438 PDRG1Q9NUG6 133 aa20■□□□□ 0.79
CLCF1-201ENST00000312438 UBR3Q6ZT12 1888 aa20■□□□□ 0.79
CLCF1-201ENST00000312438 IDH1O75874 414 aaKnown RBP19.99■□□□□ 0.79
CLCF1-201ENST00000312438 CUL4AQ13619 759 aa19.99■□□□□ 0.79
CLCF1-201ENST00000312438 POLRMTO00411 1230 aaKnown RBP19.99■□□□□ 0.79
CLCF1-201ENST00000312438 MAP3K12Q12852 859 aa19.99■□□□□ 0.79
CLCF1-201ENST00000312438 COL23A1Q86Y22 540 aaPredicted RBP19.99■□□□□ 0.79
CLCF1-201ENST00000312438 ZNF804BA4D1E1 1349 aa19.99■□□□□ 0.79
CLCF1-201ENST00000312438 AK2P54819 239 aa19.98■□□□□ 0.79
CLCF1-201ENST00000312438 CRY2Q49AN0 593 aa19.98■□□□□ 0.79
CLCF1-201ENST00000312438 INTS4Q96HW7 963 aaKnown RBP19.98■□□□□ 0.79
CLCF1-201ENST00000312438 PUS7LQ9H0K6 701 aaKnown RBP19.98■□□□□ 0.79
CLCF1-201ENST00000312438 LIMCH1Q9UPQ0 1083 aa19.98■□□□□ 0.79
CLCF1-201ENST00000312438 COL4A1P02462 1669 aa19.98■□□□□ 0.79
CLCF1-201ENST00000312438 CYP21A2P08686 494 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 GYG1P46976 350 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 DDR1Q08345 913 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 BLOC1S2Q6QNY1 142 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 VPS37DQ86XT2 251 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
CLCF1-201ENST00000312438 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 RPAP1Q9BWH6 1393 aaPredicted RBP19.97■□□□□ 0.79
CLCF1-201ENST00000312438 CPA1P15085 419 aa19.97■□□□□ 0.79
CLCF1-201ENST00000312438 NOL8Q76FK4 1167 aaKnown RBP19.97■□□□□ 0.79
CLCF1-201ENST00000312438 FAM84BQ96KN1 310 aaPredicted RBP19.97■□□□□ 0.79
CLCF1-201ENST00000312438 WTIPA6NIX2 430 aaPredicted RBP19.96■□□□□ 0.79
CLCF1-201ENST00000312438 FRAT2O75474 233 aaPredicted RBP19.96■□□□□ 0.79
CLCF1-201ENST00000312438 PDE6AP16499 860 aa19.96■□□□□ 0.79
CLCF1-201ENST00000312438 FBXO33Q7Z6M2 555 aa19.96■□□□□ 0.79
CLCF1-201ENST00000312438 RBM17Q96I25 401 aaKnown RBP19.96■□□□□ 0.79
CLCF1-201ENST00000312438 ALDH8A1Q9H2A2 487 aaPredicted RBP19.96■□□□□ 0.79
CLCF1-201ENST00000312438 RAB3GAP1Q15042 981 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 NEK1Q96PY6 1258 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 ZNF532Q9HCE3 1301 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
CLCF1-201ENST00000312438 SEMA3EO15041 775 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 GPAA1O43292 621 aa19.95■□□□□ 0.78
CLCF1-201ENST00000312438 NUCB2P80303 420 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms