RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 U3KPZ7 1027 aaPredicted RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.24
SCG2-201ENST00000305409 Q6ZUG5 572 aa13.58□□□□□ -0.24
SCG2-201ENST00000305409 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.24
SCG2-201ENST00000305409 HSPA1LP34931 641 aa13.57□□□□□ -0.24
SCG2-201ENST00000305409 HMG20BQ9P0W2 317 aa13.57□□□□□ -0.24
SCG2-201ENST00000305409 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
SCG2-201ENST00000305409 STX6O43752 255 aa13.57□□□□□ -0.24
SCG2-201ENST00000305409 FGD1P98174 961 aa13.57□□□□□ -0.24
SCG2-201ENST00000305409 SKOR2Q2VWA4 1001 aaPredicted RBP13.57□□□□□ -0.24
SCG2-201ENST00000305409 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
SCG2-201ENST00000305409 NAP1L2Q9ULW6 460 aaPredicted RBP13.57□□□□□ -0.24
SCG2-201ENST00000305409 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
SCG2-201ENST00000305409 GNPATO15228 680 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 FOXP2O15409 715 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 PHF14O94880 888 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
SCG2-201ENST00000305409 BRF1Q92994 677 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 GADD45BO75293 160 aaPredicted RBP13.56□□□□□ -0.24
SCG2-201ENST00000305409 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
SCG2-201ENST00000305409 BCAMP50895 628 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
SCG2-201ENST00000305409 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 CCDC152Q4G0S7 254 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 ZSCAN31Q96LW9 406 aaPredicted RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 WWC3Q9ULE0 1092 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 CNPY2Q9Y2B0 182 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 JAK2O60674 1132 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 FOSBP53539 338 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCG2-201ENST00000305409 BCL2L12Q9HB09 334 aa13.55□□□□□ -0.24
SCG2-201ENST00000305409 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
SCG2-201ENST00000305409 RFX7Q2KHR2 1363 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 E7EWF7 191 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 GPAA1O43292 621 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
SCG2-201ENST00000305409 FAM173BQ6P4H8 233 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 LPIN2Q92539 896 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 FGAP02671 866 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 FGFR2P21802 821 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
SCG2-201ENST00000305409 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 KRT32Q14532 448 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
SCG2-201ENST00000305409 CHRNDQ07001 517 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 RASGRF1Q13972 1273 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 SLC51AQ86UW1 340 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 RAB11FIP4Q86YS3 637 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 AFF2P51816 1311 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 APPP05067 770 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 CCT2P78371 535 aaKnown RBP13.53□□□□□ -0.24
SCG2-201ENST00000305409 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
SCG2-201ENST00000305409 APPBP2Q92624 585 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 GJD4Q96KN9 370 aaPredicted RBP13.53□□□□□ -0.24
SCG2-201ENST00000305409 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 MROH5Q6ZUA9 1318 aa13.53□□□□□ -0.24
SCG2-201ENST00000305409 COL4A1P02462 1669 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 FIBPO43427 364 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 SLC5A1P13866 664 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 PTMSP20962 102 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 NKX2-3Q8TAU0 364 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 TMEM63CQ9P1W3 806 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 ZNF532Q9HCE3 1301 aa13.52□□□□□ -0.24
SCG2-201ENST00000305409 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 F13A1P00488 732 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 ANKRD1Q15327 319 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 ZSCAN23Q3MJ62 389 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
SCG2-201ENST00000305409 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 GRPEL1Q9HAV7 217 aa13.52□□□□□ -0.25
SCG2-201ENST00000305409 NCOA5Q9HCD5 579 aaKnown RBP13.52□□□□□ -0.25
SCG2-201ENST00000305409 ADD2P35612 726 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
SCG2-201ENST00000305409 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
SCG2-201ENST00000305409 STK11IPQ8N1F8 1099 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 SPATA5Q8NB90 893 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
SCG2-201ENST00000305409 INCENPQ9NQS7 918 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 ANKRD36CQ5JPF3 1778 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 PDE6AP16499 860 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 GYG1P46976 350 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 SCRN1Q12765 414 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 MAGEB6Q8N7X4 407 aa13.51□□□□□ -0.25
SCG2-201ENST00000305409 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms