RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 VPS37DQ86XT2 251 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
PRDM9-201ENST00000296682 ESPNB1AK53 854 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 F13A1P00488 732 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 CYP21A2P08686 494 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 FOXO4P98177 505 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 NFXL1Q6ZNB6 911 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 ZSCAN31Q96LW9 406 aaPredicted RBP11.01□□□□□ -0.65
PRDM9-201ENST00000296682 TSPY26PQ9H489 355 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 DOCK2Q92608 1830 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 ERBB4Q15303 1308 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 SF3A1Q15459 793 aaKnown RBP11.01□□□□□ -0.65
PRDM9-201ENST00000296682 SPC24Q8NBT2 197 aa11.01□□□□□ -0.65
PRDM9-201ENST00000296682 ZNF830Q96NB3 372 aaPredicted RBP11.01□□□□□ -0.65
PRDM9-201ENST00000296682 NIP7Q9Y221 180 aaKnown RBP eCLIP11.01□□□□□ -0.65
PRDM9-201ENST00000296682 H7C1W4 665 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 TRDNQ13061 729 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 SCARF1Q14162 830 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 SPATA32Q96LK8 384 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
PRDM9-201ENST00000296682 DISP2A7MBM2 1401 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 KCNQ2O43526 872 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 POLR3DP05423 398 aaPredicted RBP11□□□□□ -0.65
PRDM9-201ENST00000296682 RPS6KB1P23443 525 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 USP25Q9UHP3 1055 aa11□□□□□ -0.65
PRDM9-201ENST00000296682 PHF14O94880 888 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 RFX5P48382 616 aaPredicted RBP10.99□□□□□ -0.65
PRDM9-201ENST00000296682 KRT85P78386 507 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 SEC31BQ9NQW1 1179 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 U3KPZ7 1027 aaPredicted RBP10.99□□□□□ -0.65
PRDM9-201ENST00000296682 COL5A3P25940 1745 aaPredicted RBP10.99□□□□□ -0.65
PRDM9-201ENST00000296682 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
PRDM9-201ENST00000296682 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 SH2B1Q9NRF2 756 aaPredicted RBP10.99□□□□□ -0.65
PRDM9-201ENST00000296682 BCORQ6W2J9 1755 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 NWD2Q9ULI1 1742 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 TTC14Q96N46 770 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 AKAP2Q9Y2D5 859 aa10.99□□□□□ -0.65
PRDM9-201ENST00000296682 CASP7P55210 303 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 HAUS7Q99871 368 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
PRDM9-201ENST00000296682 INCENPQ9NQS7 918 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 MINDY4BA8MYZ0 360 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 KRT32Q14532 448 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 ERCC4Q92889 916 aaPredicted RBP10.98□□□□□ -0.65
PRDM9-201ENST00000296682 OSBP2Q969R2 916 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
PRDM9-201ENST00000296682 ZNF213O14771 459 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 PDCP20941 246 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 IMMTQ16891 758 aaKnown RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 ZKSCAN3Q9BRR0 538 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 TEX13AQ9BXU3 409 aaPredicted RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 HSPD1P10809 573 aaKnown RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 CHAF1AQ13111 956 aaPredicted RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 FTOQ9C0B1 505 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 GJB4Q9NTQ9 266 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 MTMR6Q9Y217 621 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
PRDM9-201ENST00000296682 PHKA1P46020 1223 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 ME1P48163 572 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 ZNF445P59923 1031 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 TSGA10IPQ3SY00 556 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 MYL10Q9BUA6 226 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 RAI14Q9P0K7 980 aa10.97□□□□□ -0.65
PRDM9-201ENST00000296682 A0A087WWV3 80 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 M0R2C6 588 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
PRDM9-201ENST00000296682 NLRP10Q86W26 655 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 PUS7LQ9H0K6 701 aaKnown RBP10.96□□□□□ -0.65
PRDM9-201ENST00000296682 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 CSPP1Q1MSJ5 1256 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 ZBTB38Q8NAP3 1195 aaPredicted RBP10.96□□□□□ -0.65
PRDM9-201ENST00000296682 NUP133Q8WUM0 1156 aa10.96□□□□□ -0.65
PRDM9-201ENST00000296682 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.66
PRDM9-201ENST00000296682 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.66
PRDM9-201ENST00000296682 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.66
PRDM9-201ENST00000296682 TM6SF1Q9BZW5 370 aa10.96□□□□□ -0.66
PRDM9-201ENST00000296682 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.66
PRDM9-201ENST00000296682 NUP98P52948 1817 aa10.96□□□□□ -0.66
PRDM9-201ENST00000296682 IGHMBP2P38935 993 aaKnown RBP10.95□□□□□ -0.66
PRDM9-201ENST00000296682 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
PRDM9-201ENST00000296682 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms