RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 MYCBPQ99417 103 aaPredicted RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 MAP2K2P36507 400 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 CDK5RAP3Q96JB5 506 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 RAD21O60216 631 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 TUBB4BP68371 445 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
CASC3-201ENST00000264645 AIDAQ96BJ3 306 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 OSBPL3Q9H4L5 887 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
CASC3-201ENST00000264645 IFFO1Q0D2I5 559 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 TDRD12Q587J7 1177 aaKnown RBP17.2■□□□□ 0.34
CASC3-201ENST00000264645 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 OPA1O60313 960 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
CASC3-201ENST00000264645 USP27XA6NNY8 438 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
CASC3-201ENST00000264645 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
CASC3-201ENST00000264645 LIG3P49916 1009 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
CASC3-201ENST00000264645 PPARDQ03181 441 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
CASC3-201ENST00000264645 ATL3Q6DD88 541 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 KANK3Q6NY19 840 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
CASC3-201ENST00000264645 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 PSDA5PKW4 1024 aaPredicted RBP17.19■□□□□ 0.34
CASC3-201ENST00000264645 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 CACNA2D4Q7Z3S7 1137 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 CCDC114Q96M63 670 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 NFE2L3Q9Y4A8 694 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 AOX1Q06278 1338 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
CASC3-201ENST00000264645 ACTN2P35609 894 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 GRM8O00222 908 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 RXRAP19793 462 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 NLRP12P59046 1061 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
CASC3-201ENST00000264645 DHX58Q96C10 678 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 CTAGE1Q96RT6 745 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 JRKLQ9Y4A0 524 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
CASC3-201ENST00000264645 AKR1B10O60218 316 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 BRD3Q15059 726 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 LONRF3Q496Y0 759 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 RRAGBQ5VZM2 374 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 DYDC1Q8WWB3 177 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 GOLGA6CA6NDK9 693 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 GOLGA6DP0CG33 693 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
CASC3-201ENST00000264645 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 EHBP1Q8NDI1 1231 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
CASC3-201ENST00000264645 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
CASC3-201ENST00000264645 GOLGA6AQ9NYA3 693 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 PPP2R2CQ9Y2T4 447 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 PRC1O43663 620 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 LONRF2Q1L5Z9 754 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 CCDC96Q2M329 555 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
CASC3-201ENST00000264645 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
CASC3-201ENST00000264645 NAPBQ9H115 298 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 NCKAP5LQ9HCH0 1330 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 CCT6AP40227 531 aaKnown RBP17.17■□□□□ 0.34
CASC3-201ENST00000264645 MAP2K1Q02750 393 aaPredicted RBP17.17■□□□□ 0.34
CASC3-201ENST00000264645 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 ANO1Q5XXA6 986 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 BRAPQ7Z569 592 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 ZNF518AQ6AHZ1 1483 aa17.17■□□□□ 0.34
CASC3-201ENST00000264645 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
CASC3-201ENST00000264645 FTOQ9C0B1 505 aaKnown RBP eCLIP17.16■□□□□ 0.34
CASC3-201ENST00000264645 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
CASC3-201ENST00000264645 CCDC121Q6ZUS5 278 aa17.16■□□□□ 0.34
CASC3-201ENST00000264645 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
CASC3-201ENST00000264645 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
CASC3-201ENST00000264645 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
CASC3-201ENST00000264645 CYLC1P35663 651 aaPredicted RBP17.16■□□□□ 0.34
CASC3-201ENST00000264645 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
CASC3-201ENST00000264645 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
CASC3-201ENST00000264645 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
CASC3-201ENST00000264645 CCDC196A0A1B0GTZ2 297 aa17.15■□□□□ 0.34
CASC3-201ENST00000264645 KRT86O43790 486 aa17.15■□□□□ 0.34
CASC3-201ENST00000264645 CCDC122Q5T0U0 273 aa17.15■□□□□ 0.34
CASC3-201ENST00000264645 EFCC1Q9HA90 598 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms