RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TPD52L1Q16890 204 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 KCNB2Q92953 911 aa17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
SFSWAP-201ENST00000261674 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.31
SFSWAP-201ENST00000261674 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 TTLL7Q6ZT98 887 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 TPM3P06753 285 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 ME1P48163 572 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
SFSWAP-201ENST00000261674 TNNT1P13805 278 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 NAA30Q147X3 362 aaPredicted RBP17■□□□□ 0.31
SFSWAP-201ENST00000261674 CLSTN2Q9H4D0 955 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 HMG20BQ9P0W2 317 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 A0A0G2JLW4 131 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 SCRN1Q12765 414 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 KRT32Q14532 448 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 CCAR1Q8IX12 1150 aaKnown RBP17■□□□□ 0.31
SFSWAP-201ENST00000261674 ZNF75DP51815 510 aa17■□□□□ 0.31
SFSWAP-201ENST00000261674 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
SFSWAP-201ENST00000261674 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
SFSWAP-201ENST00000261674 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 METTL22Q9BUU2 404 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 TBC1D2BQ9UPU7 963 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 U2AF2P26368 475 aaKnown RBP eCLIP16.99■□□□□ 0.315e-9■■■■■ 35.4
SFSWAP-201ENST00000261674 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
SFSWAP-201ENST00000261674 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 ELP1O95163 1332 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 NPHP1O15259 732 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 HAND2P61296 217 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 SDF4Q9BRK5 362 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 ATP5JP18859 108 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 ZSCAN25Q6NSZ9 544 aa16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-201ENST00000261674 GPTP24298 496 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 C11orf57Q6ZUT1 292 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 ZNF594Q96JF6 807 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 RESTQ13127 1097 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 V9GYY5 206 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 COL15A1P39059 1388 aa16.97■□□□□ 0.31
SFSWAP-201ENST00000261674 PTPDC1A2A3K4 754 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 TTLL5Q6EMB2 1281 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 VPS72Q15906 364 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-201ENST00000261674 MED23Q9ULK4 1368 aa16.96■□□□□ 0.3
SFSWAP-201ENST00000261674 CRYBG1Q9Y4K1 1723 aa16.95■□□□□ 0.3
SFSWAP-201ENST00000261674 ISM2Q6H9L7 571 aa16.95■□□□□ 0.3
SFSWAP-201ENST00000261674 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-201ENST00000261674 BIN1O00499 593 aa16.95■□□□□ 0.3
SFSWAP-201ENST00000261674 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
SFSWAP-201ENST00000261674 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 CCDC112Q8NEF3 446 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 A0A1B0GVL5 298 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 PDIA4P13667 645 aaKnown RBP16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 SPATA31A6Q5VVP1 1343 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
SFSWAP-201ENST00000261674 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 TRIM37O94972 964 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 ZNF609O15014 1411 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 BICDL1Q6ZP65 573 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 NSUN7Q8NE18 718 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-201ENST00000261674 GOLPH3LQ9H4A5 285 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms