RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 PRIMPOLQ96LW4 560 aa5.82□□□□□ -1.48
CDRT1-201ENST00000261644 DBNDD2Q9BQY9 259 aa5.82□□□□□ -1.48
CDRT1-201ENST00000261644 PBX4Q9BYU1 374 aa5.82□□□□□ -1.48
CDRT1-201ENST00000261644 STIM2Q9P246 746 aa5.82□□□□□ -1.48
CDRT1-201ENST00000261644 HIF3AQ9Y2N7 669 aa5.82□□□□□ -1.48
CDRT1-201ENST00000261644 ABCC9O60706 1549 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 PRMT3O60678 531 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 ATG7O95352 703 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 MED26O95402 600 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 TGFB1P01137 390 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 PTPRAP18433 802 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 GRIK1P39086 918 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 IRAK1P51617 712 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 TTC39BQ5VTQ0 682 aaPredicted RBP5.81□□□□□ -1.48
CDRT1-201ENST00000261644 CEP135Q66GS9 1140 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 ANKRD34AQ69YU3 496 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 FAM117BQ6P1L5 589 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.81□□□□□ -1.48
CDRT1-201ENST00000261644 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 CLP1Q92989 425 aaKnown RBP5.81□□□□□ -1.48
CDRT1-201ENST00000261644 UTP4Q969X6 686 aaKnown RBP5.81□□□□□ -1.48
CDRT1-201ENST00000261644 C7orf69Q9H7B7 122 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 OSGEPQ9NPF4 335 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 KCNK4Q9NYG8 393 aa5.81□□□□□ -1.48
CDRT1-201ENST00000261644 H3BRJ5 948 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 RPLP1P05386 114 aaKnown RBP5.8□□□□□ -1.48
CDRT1-201ENST00000261644 RANGAP1P46060 587 aaPredicted RBP5.8□□□□□ -1.48
CDRT1-201ENST00000261644 GP2P55259 537 aaKnown RBP5.8□□□□□ -1.48
CDRT1-201ENST00000261644 PIP4K2BP78356 416 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 XKR5Q6UX68 686 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 CLEC10AQ8IUN9 316 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 HOMEZQ8IX15 550 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 FOXD4L4Q8WXT5 416 aaPredicted RBP5.8□□□□□ -1.48
CDRT1-201ENST00000261644 RASSF4Q9H2L5 321 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 SEC31BQ9NQW1 1179 aa5.8□□□□□ -1.48
CDRT1-201ENST00000261644 PRR19A6NJB7 356 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 ADAM11O75078 769 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 EPHA1P21709 976 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 SCNN1AP37088 669 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 CPSF6Q16630 551 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDRT1-201ENST00000261644 DUOXA2Q1HG44 320 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 ADAMTSL4Q6UY14 1074 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 FAM20CQ8IXL6 584 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 FAM83CQ9BQN1 747 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 LACRTQ9GZZ8 138 aa5.79□□□□□ -1.48
CDRT1-201ENST00000261644 OAS3Q9Y6K5 1087 aaKnown RBP5.79□□□□□ -1.48
CDRT1-201ENST00000261644 RSF1Q96T23 1441 aaPredicted RBP5.79□□□□□ -1.48
CDRT1-201ENST00000261644 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 MEGF11A6BM72 1044 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 RB1CC1Q8TDY2 1594 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 POP1Q99575 1024 aaKnown RBP5.78□□□□□ -1.48
CDRT1-201ENST00000261644 RNF208Q9H0X6 261 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 SALL4Q9UJQ4 1053 aa5.78□□□□□ -1.48
CDRT1-201ENST00000261644 LOC105371045A0A1W2PR82 267 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 TXNDC11Q6PKC3 985 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 GPR152Q8TDT2 470 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 CARD10Q9BWT7 1032 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 ELP3Q9H9T3 547 aa5.77□□□□□ -1.49
CDRT1-201ENST00000261644 HMX2A2RU54 273 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 NFKBIEO00221 500 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 ZBTB39O15060 712 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 YBX3P16989 372 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDRT1-201ENST00000261644 CABP4P57796 275 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 CDCA8Q53HL2 280 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 TMEM164Q5U3C3 297 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 NCAPG2Q86XI2 1143 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 KLHDC7BQ96G42 594 aa5.76□□□□□ -1.49
CDRT1-201ENST00000261644 ZNF777Q9ULD5 760 aaPredicted RBP5.76□□□□□ -1.49
CDRT1-201ENST00000261644 CYP2E1P05181 493 aaPredicted RBP5.75□□□□□ -1.49
CDRT1-201ENST00000261644 TAL1P17542 331 aaPredicted RBP5.75□□□□□ -1.49
CDRT1-201ENST00000261644 UBASH3BQ8TF42 649 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 PMEPA1Q969W9 287 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 MKNK1Q9BUB5 465 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 ZMYND15Q9H091 742 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 SUGCTQ9HAC7 445 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 DZANK1Q9NVP4 752 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 TMEM63CQ9P1W3 806 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 SOX13Q9UN79 622 aa5.75□□□□□ -1.49
CDRT1-201ENST00000261644 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 ADAMTS4O75173 837 aa5.74□□□□□ -1.49
CDRT1-201ENST00000261644 WNT11O96014 354 aa5.74□□□□□ -1.49
CDRT1-201ENST00000261644 PREPP48147 710 aa5.74□□□□□ -1.49
CDRT1-201ENST00000261644 NAA30Q147X3 362 aaPredicted RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 BEND4Q6ZU67 534 aa5.74□□□□□ -1.49
CDRT1-201ENST00000261644 ZNF438Q7Z4V0 828 aa5.74□□□□□ -1.49
CDRT1-201ENST00000261644 TMEM102Q8N9M5 508 aaPredicted RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 NUDT16Q96DE0 195 aaKnown RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 SOX17Q9H6I2 414 aaPredicted RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 SH2B1Q9NRF2 756 aaPredicted RBP5.74□□□□□ -1.49
CDRT1-201ENST00000261644 DDX3YO15523 660 aaKnown RBP5.73□□□□□ -1.49
CDRT1-201ENST00000261644 BMP3P12645 472 aa5.73□□□□□ -1.49
CDRT1-201ENST00000261644 SHKBP1Q8TBC3 707 aa5.73□□□□□ -1.49
CDRT1-201ENST00000261644 HELQQ8TDG4 1101 aa5.73□□□□□ -1.49
CDRT1-201ENST00000261644 RUSC1Q9BVN2 902 aa5.73□□□□□ -1.49
CDRT1-201ENST00000261644 CNTN3Q9P232 1028 aa5.73□□□□□ -1.49
CDRT1-201ENST00000261644 PDE2AO00408 941 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms