RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 APOBRQ0VD83 1088 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
PXN-201ENST00000228307 ZSWIM4Q9H7M6 989 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
PXN-201ENST00000228307 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
PXN-201ENST00000228307 SPATA31A3Q5VYP0 1347 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 ZSCAN20P17040 1043 aaPredicted RBP18.28■□□□□ 0.52
PXN-201ENST00000228307 TAF3Q5VWG9 929 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 IFNKQ9P0W0 207 aa18.28■□□□□ 0.52
PXN-201ENST00000228307 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
PXN-201ENST00000228307 KIF2AO00139 706 aaPredicted RBP18.27■□□□□ 0.52
PXN-201ENST00000228307 CAVIN2O95810 425 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 STARD3NLO95772 234 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 GCKRQ14397 625 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 EPHA10Q5JZY3 1008 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 TMEM87AQ8NBN3 555 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
PXN-201ENST00000228307 C8orf76Q96K31 380 aa18.27■□□□□ 0.52
PXN-201ENST00000228307 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
PXN-201ENST00000228307 GSDMDP57764 484 aa18.27■□□□□ 0.51
PXN-201ENST00000228307 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.51
PXN-201ENST00000228307 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.51
PXN-201ENST00000228307 ARHGAP29Q52LW3 1261 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 IQSEC3Q9UPP2 1182 aaPredicted RBP18.26■□□□□ 0.51
PXN-201ENST00000228307 BMS1Q14692 1282 aaKnown RBP18.26■□□□□ 0.51
PXN-201ENST00000228307 EAF2Q96CJ1 260 aaPredicted RBP18.26■□□□□ 0.51
PXN-201ENST00000228307 SPTLC3Q9NUV7 552 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
PXN-201ENST00000228307 CEP126Q9P2H0 1117 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 PRDM4Q9UKN5 801 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
PXN-201ENST00000228307 OTUD7BQ6GQQ9 843 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 TTC14Q96N46 770 aa18.26■□□□□ 0.51
PXN-201ENST00000228307 FTOQ9C0B1 505 aaKnown RBP eCLIP18.26■□□□□ 0.51
PXN-201ENST00000228307 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
PXN-201ENST00000228307 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 GOLGA6L1Q8N7Z2 621 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 LMTK3Q96Q04 1460 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 DBNDD2Q9BQY9 259 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 SMIM5Q71RC9 77 aa18.25■□□□□ 0.51
PXN-201ENST00000228307 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
PXN-201ENST00000228307 USP32Q8NFA0 1604 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
PXN-201ENST00000228307 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
PXN-201ENST00000228307 AP5Z1O43299 807 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 MARCKSP29966 332 aaPredicted RBP18.24■□□□□ 0.51
PXN-201ENST00000228307 SLFNL1Q499Z3 407 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.24■□□□□ 0.51
PXN-201ENST00000228307 TIGD1Q96MW7 591 aa18.24■□□□□ 0.51
PXN-201ENST00000228307 ERCC6LQ2NKX8 1250 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 LRRC8AQ8IWT6 810 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 MRPS27Q92552 414 aaKnown RBP18.23■□□□□ 0.51
PXN-201ENST00000228307 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 CHGBP05060 677 aa18.23■□□□□ 0.51
PXN-201ENST00000228307 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
PXN-201ENST00000228307 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
PXN-201ENST00000228307 VGLL3A8MV65 326 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 EPB41L2O43491 1005 aaKnown RBP18.22■□□□□ 0.51
PXN-201ENST00000228307 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 CALCOCO1Q9P1Z2 691 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 SLIT1O75093 1534 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 CCP110O43303 1012 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
PXN-201ENST00000228307 IDH1O75874 414 aaKnown RBP18.22■□□□□ 0.51
PXN-201ENST00000228307 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
PXN-201ENST00000228307 DDB1Q16531 1140 aa18.21■□□□□ 0.51
PXN-201ENST00000228307 LRRFIP1Q32MZ4 808 aaKnown RBP18.21■□□□□ 0.51
PXN-201ENST00000228307 C11orf57Q6ZUT1 292 aaPredicted RBP18.21■□□□□ 0.51
PXN-201ENST00000228307 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
PXN-201ENST00000228307 LDHAL6AQ6ZMR3 332 aa18.21■□□□□ 0.51
PXN-201ENST00000228307 GNG11P61952 73 aa18.21■□□□□ 0.51
PXN-201ENST00000228307 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
PXN-201ENST00000228307 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 GOLGA8BA8MQT2 603 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 FAM98CQ17RN3 349 aaKnown RBP18.2■□□□□ 0.5
PXN-201ENST00000228307 IFIT1P09914 478 aaKnown RBP18.2■□□□□ 0.5
PXN-201ENST00000228307 UBASH3AP57075 661 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 CCDC144BQ3MJ40 725 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 USP28Q96RU2 1077 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 PXDNQ92626 1479 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 RASSF8Q8NHQ8 419 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 CPLX3Q8WVH0 158 aa18.2■□□□□ 0.5
PXN-201ENST00000228307 HOOK1Q9UJC3 728 aaKnown RBP18.2■□□□□ 0.5
PXN-201ENST00000228307 HOXB7P09629 217 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms