RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 FAM160A1Q05DH4 1040 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 IMMTQ16891 758 aaKnown RBP13.04□□□□□ -0.32
NEFM-201ENST00000221166 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
NEFM-201ENST00000221166 HSPD1P10809 573 aaKnown RBP13.03□□□□□ -0.32
NEFM-201ENST00000221166 NFXL1Q6ZNB6 911 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
NEFM-201ENST00000221166 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 GJB4Q9NTQ9 266 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 A0A1B0GUL7 405 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
NEFM-201ENST00000221166 RXRAP19793 462 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
NEFM-201ENST00000221166 CAVIN2O95810 425 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 ATF3P18847 181 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
NEFM-201ENST00000221166 PXDNQ92626 1479 aa13.03□□□□□ -0.32
NEFM-201ENST00000221166 RGPD1P0DJD0 1748 aa13.02□□□□□ -0.32
NEFM-201ENST00000221166 USP27XA6NNY8 438 aa13.02□□□□□ -0.32
NEFM-201ENST00000221166 SLC3A2P08195 630 aaKnown RBP13.02□□□□□ -0.32
NEFM-201ENST00000221166 IFNKQ9P0W0 207 aa13.02□□□□□ -0.32
NEFM-201ENST00000221166 ZNF609O15014 1411 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
NEFM-201ENST00000221166 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 RCOR1Q9UKL0 485 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 PCDHA7Q9UN72 937 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 PRC1O43663 620 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 DHX16O60231 1041 aaKnown RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 LRRFIP1Q32MZ4 808 aaKnown RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 CHMP4CQ96CF2 233 aa13.02□□□□□ -0.33
NEFM-201ENST00000221166 XRN1Q8IZH2 1706 aaKnown RBP13.02□□□□□ -0.33
NEFM-201ENST00000221166 IL15P40933 162 aaPredicted RBP13.01□□□□□ -0.33
NEFM-201ENST00000221166 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 NPHP4O75161 1426 aaPredicted RBP13.01□□□□□ -0.33
NEFM-201ENST00000221166 SERPINC1P01008 464 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 PLBD2Q8NHP8 589 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
NEFM-201ENST00000221166 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
NEFM-201ENST00000221166 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
NEFM-201ENST00000221166 SPTLC2O15270 562 aa13□□□□□ -0.33
NEFM-201ENST00000221166 RFX5P48382 616 aaPredicted RBP13□□□□□ -0.33
NEFM-201ENST00000221166 NDUFA8P51970 172 aa13□□□□□ -0.33
NEFM-201ENST00000221166 NCBP1Q09161 790 aaKnown RBP13□□□□□ -0.33
NEFM-201ENST00000221166 UTYO14607 1347 aa13□□□□□ -0.33
NEFM-201ENST00000221166 ERBB3P21860 1342 aa13□□□□□ -0.33
NEFM-201ENST00000221166 ZNF213O14771 459 aa13□□□□□ -0.33
NEFM-201ENST00000221166 IDH1O75874 414 aaKnown RBP13□□□□□ -0.33
NEFM-201ENST00000221166 CTDNEP1O95476 244 aa13□□□□□ -0.33
NEFM-201ENST00000221166 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
NEFM-201ENST00000221166 PDILTQ8N807 584 aa13□□□□□ -0.33
NEFM-201ENST00000221166 DCAF5Q96JK2 942 aa13□□□□□ -0.33
NEFM-201ENST00000221166 UBR1Q8IWV7 1749 aa13□□□□□ -0.33
NEFM-201ENST00000221166 EYA2O00167 538 aa13□□□□□ -0.33
NEFM-201ENST00000221166 NEMFO60524 1076 aa13□□□□□ -0.33
NEFM-201ENST00000221166 CCDC82Q8N4S0 544 aa13□□□□□ -0.33
NEFM-201ENST00000221166 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
NEFM-201ENST00000221166 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
NEFM-201ENST00000221166 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
NEFM-201ENST00000221166 COL15A1P39059 1388 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 FAM208AQ9UK61 1670 aaKnown RBP12.99□□□□□ -0.33
NEFM-201ENST00000221166 IQCB1Q15051 598 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
NEFM-201ENST00000221166 MAST3O60307 1309 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 M0R2C6 588 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
NEFM-201ENST00000221166 TRIM29Q14134 588 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 OSBP2Q969R2 916 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 NWD1Q149M9 1564 aa12.99□□□□□ -0.33
NEFM-201ENST00000221166 GPTP24298 496 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 ADORA1P30542 326 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
NEFM-201ENST00000221166 ZMYM1Q5SVZ6 1142 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 CDK11BP21127 795 aaKnown RBP12.98□□□□□ -0.33
NEFM-201ENST00000221166 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 SYT10Q6XYQ8 523 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 SMARCC2Q8TAQ2 1214 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
NEFM-201ENST00000221166 CYP27B1O15528 508 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 CNNM1Q9NRU3 951 aa12.98□□□□□ -0.33
NEFM-201ENST00000221166 ELF2Q15723 593 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms