RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 PCGF5Q86SE9 256 aa10.63□□□□□ -0.71
VSIG1-201ENST00000217957 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
VSIG1-201ENST00000217957 ASPSCR1Q9BZE9 553 aa10.63□□□□□ -0.71
VSIG1-201ENST00000217957 TMEM260Q9NX78 707 aa10.63□□□□□ -0.71
VSIG1-201ENST00000217957 LUZP4Q9P127 313 aa10.63□□□□□ -0.71
VSIG1-201ENST00000217957 NFKB2Q00653 900 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 ZRSR2Q15696 482 aaKnown RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 PPM1EQ8WY54 764 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 POLIQ9UNA4 740 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 GJA3Q9Y6H8 435 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 WASLO00401 505 aaPredicted RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 DEKP35659 375 aaKnown RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 C16orf86Q6ZW13 317 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 ANKRD42Q8N9B4 389 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 RSPH9Q9H1X1 276 aaPredicted RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 AK5Q9Y6K8 562 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 NCOA1Q15788 1441 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 ISY1Q9ULR0 285 aaKnown RBP10.62□□□□□ -0.71
VSIG1-201ENST00000217957 PCDHGA11Q9Y5H2 935 aa10.62□□□□□ -0.71
VSIG1-201ENST00000217957 ZBED6P86452 979 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 JPH3Q8WXH2 748 aaPredicted RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 ADAMTS1Q9UHI8 967 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 VSTM5A8MXK1 200 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 VARSP26640 1264 aaKnown RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 GEMIN4P57678 1058 aaKnown RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 MTMR1Q13613 665 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 SCG3Q8WXD2 468 aaKnown RBP10.61□□□□□ -0.71
VSIG1-201ENST00000217957 SIRPGQ9P1W8 387 aa10.61□□□□□ -0.71
VSIG1-201ENST00000217957 HIP1RO75146 1068 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 AGR2O95994 175 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 ST13P50502 369 aaKnown RBP10.6□□□□□ -0.71
VSIG1-201ENST00000217957 TRIM50Q86XT4 487 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 THNSL2Q86YJ6 484 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 WASHC2CQ9Y4E1 1318 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 ACBD5Q5T8D3 534 aaPredicted RBP10.6□□□□□ -0.71
VSIG1-201ENST00000217957 FBF1Q8TES7 1133 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
VSIG1-201ENST00000217957 GEMIN8Q9NWZ8 242 aaKnown RBP10.6□□□□□ -0.71
VSIG1-201ENST00000217957 USPL1Q5W0Q7 1092 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 HDGFL2Q7Z4V5 671 aaPredicted RBP10.59□□□□□ -0.71
VSIG1-201ENST00000217957 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 CNTLNQ9NXG0 1405 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 SERPINB3P29508 390 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 EPHB1P54762 984 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 SPICE1Q8N0Z3 855 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 DMRTB1Q96MA1 342 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 UBP1Q9NZI7 540 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 PTCH2Q9Y6C5 1203 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
VSIG1-201ENST00000217957 LMNB1P20700 586 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 SVIPQ8NHG7 77 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 EPS8L3Q8TE67 593 aaKnown RBP10.59□□□□□ -0.71
VSIG1-201ENST00000217957 SLC45A1Q9Y2W3 748 aa10.59□□□□□ -0.71
VSIG1-201ENST00000217957 PDE8AO60658 829 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 FBXO24O75426 580 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 MYL3P08590 195 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 PPM1FP49593 454 aaPredicted RBP10.58□□□□□ -0.72
VSIG1-201ENST00000217957 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
VSIG1-201ENST00000217957 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
VSIG1-201ENST00000217957 CT47B1P0C2W7 299 aaPredicted RBP10.58□□□□□ -0.72
VSIG1-201ENST00000217957 TPH2Q8IWU9 490 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 ADAM32Q8TC27 787 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 MAPK8IP1Q9UQF2 711 aa10.58□□□□□ -0.72
VSIG1-201ENST00000217957 ARSHQ5FYA8 562 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 TSPAN10Q9H1Z9 355 aaPredicted RBP10.57□□□□□ -0.72
VSIG1-201ENST00000217957 RAB15P59190 212 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 APOBRQ0VD83 1088 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 VPS72Q15906 364 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 STRA8Q7Z7C7 330 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 DGKHQ86XP1 1220 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
VSIG1-201ENST00000217957 TNS4Q8IZW8 715 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
VSIG1-201ENST00000217957 B2RBV5 119 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 EIF1AYO14602 144 aaKnown RBP10.56□□□□□ -0.72
VSIG1-201ENST00000217957 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
VSIG1-201ENST00000217957 ESCO1Q5FWF5 840 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 CCDC174Q6PII3 467 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 CPLX3Q8WVH0 158 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 JADE2Q9NQC1 790 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 PCDHGB3Q9Y5G1 929 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 MTUS2Q5JR59 1369 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
VSIG1-201ENST00000217957 NPR3P17342 541 aa10.56□□□□□ -0.72
VSIG1-201ENST00000217957 BMP2KQ9NSY1 1161 aaPredicted RBP10.56□□□□□ -0.72
VSIG1-201ENST00000217957 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms