RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 PHKBQ93100 1093 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 ZAP70P43403 619 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 MYRIPQ8NFW9 859 aa17.68■□□□□ 0.42
EFNB1-201ENST00000204961 XRN1Q8IZH2 1706 aaKnown RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 CTDNEP1O95476 244 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 RFX5P48382 616 aaPredicted RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 CREBRFQ8IUR6 639 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 KBTBD3Q8NAB2 608 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 NSUN7Q8NE18 718 aaKnown RBP17.67■□□□□ 0.42
EFNB1-201ENST00000204961 CLIC4Q9Y696 253 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 REREQ9P2R6 1566 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 ATP2B3Q16720 1220 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 TBC1D2BQ9UPU7 963 aa17.67■□□□□ 0.42
EFNB1-201ENST00000204961 RESTQ13127 1097 aa17.66■□□□□ 0.42
EFNB1-201ENST00000204961 CLSTN2Q9H4D0 955 aa17.66■□□□□ 0.42
EFNB1-201ENST00000204961 COPRSQ9NQ92 184 aa17.66■□□□□ 0.42
EFNB1-201ENST00000204961 ADD1P35611 737 aaKnown RBP17.66■□□□□ 0.42
EFNB1-201ENST00000204961 ZNF75DP51815 510 aa17.66■□□□□ 0.42
EFNB1-201ENST00000204961 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
EFNB1-201ENST00000204961 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
EFNB1-201ENST00000204961 LMOD1P29536 600 aaPredicted RBP17.65■□□□□ 0.42
EFNB1-201ENST00000204961 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
EFNB1-201ENST00000204961 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
EFNB1-201ENST00000204961 MAST3O60307 1309 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 NPHP4O75161 1426 aaPredicted RBP17.65■□□□□ 0.42
EFNB1-201ENST00000204961 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 PDCL2Q8N4E4 241 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 ZSCAN25Q6NSZ9 544 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 HAUS7Q99871 368 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 SENP2Q9HC62 589 aa17.65■□□□□ 0.42
EFNB1-201ENST00000204961 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 METTL24Q5JXM2 366 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 FAM208AQ9UK61 1670 aaKnown RBP17.64■□□□□ 0.41
EFNB1-201ENST00000204961 KRT32Q14532 448 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 C8orf76Q96K31 380 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 CFAP45Q9UL16 551 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
EFNB1-201ENST00000204961 PDIA3P30101 505 aaKnown RBP17.64■□□□□ 0.41
EFNB1-201ENST00000204961 DNAJC10Q8IXB1 793 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 XAGE2Q96GT9 111 aa17.64■□□□□ 0.41
EFNB1-201ENST00000204961 PRC1O43663 620 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 TERF1P54274 439 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 PDILTQ8N807 584 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 DCAF5Q96JK2 942 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
EFNB1-201ENST00000204961 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 FGAP02671 866 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 SKILP12757 684 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 NDUFA8P51970 172 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 CCDC158Q5M9N0 1113 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
EFNB1-201ENST00000204961 FOXO4P98177 505 aa17.62■□□□□ 0.41
EFNB1-201ENST00000204961 PCDHA7Q9UN72 937 aa17.62■□□□□ 0.41
EFNB1-201ENST00000204961 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
EFNB1-201ENST00000204961 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
EFNB1-201ENST00000204961 MED23Q9ULK4 1368 aa17.62■□□□□ 0.41
EFNB1-201ENST00000204961 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
EFNB1-201ENST00000204961 EYA2O00167 538 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 RNF113AO15541 343 aaKnown RBP17.61■□□□□ 0.41
EFNB1-201ENST00000204961 DPCR1Q3MIW9 517 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 SLC9C2Q5TAH2 1124 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 TMC6Q7Z403 805 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 B4E1Z4 1266 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
EFNB1-201ENST00000204961 C19orf44Q9H6X5 657 aa17.61■□□□□ 0.41
EFNB1-201ENST00000204961 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
EFNB1-201ENST00000204961 BAZ2BQ9UIF8 2168 aaKnown RBP17.61■□□□□ 0.41
EFNB1-201ENST00000204961 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
EFNB1-201ENST00000204961 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
EFNB1-201ENST00000204961 COBLO75128 1261 aa17.6■□□□□ 0.41
EFNB1-201ENST00000204961 IFNKQ9P0W0 207 aa17.6■□□□□ 0.41
EFNB1-201ENST00000204961 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
EFNB1-201ENST00000204961 HLFQ16534 295 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 LTN1O94822 1766 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 FDPSP14324 419 aaKnown RBP17.59■□□□□ 0.41
EFNB1-201ENST00000204961 SMAP1Q8IYB5 467 aaPredicted RBP17.59■□□□□ 0.41
EFNB1-201ENST00000204961 CCDC112Q8NEF3 446 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 NUP133Q8WUM0 1156 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 MEGF6O75095 1541 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 ZNF213O14771 459 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
EFNB1-201ENST00000204961 MIGA1Q8NAN2 632 aa17.59■□□□□ 0.41
EFNB1-201ENST00000204961 KCNQ4P56696 695 aa17.58■□□□□ 0.41
EFNB1-201ENST00000204961 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.41
EFNB1-201ENST00000204961 IMMTQ16891 758 aaKnown RBP17.58■□□□□ 0.41
EFNB1-201ENST00000204961 JAG2Q9Y219 1238 aa17.58■□□□□ 0.41
EFNB1-201ENST00000204961 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms