RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 RubcnlQ3TD16 648 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Rnf20Q5DTM8 973 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Dbndd1Q9CZ00 160 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Plekho1Q9JIY0 408 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Lrrc43Q3V0L5 667 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Kdm4aQ8BW72 1064 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Rbm33Q9CXK9 1231 aaKnown RBP15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Kcnq5Q9JK45 933 aa15.89■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Hspd1P63038 573 aaKnown RBP15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Plbd2Q3TCN2 594 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Edrf1Q6GQV7 1239 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ift57Q8BXG3 429 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ptcd1Q8C2E4 695 aaKnown RBP15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 CpvlQ9D3S9 478 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Lrp5Q91VN0 1614 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 C4bP01029 1738 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Lmod3E9QA62 571 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Tlr8P58682 1032 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Usp48Q3V0C5 1052 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Znf496Q5SXI5 585 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 HmcesQ8R1M0 353 aaKnown RBP15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Prr29B1ARI9 187 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Slurp2P0DP59 97 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Rtkn2Q14B46 604 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Mindy4Q3UQI9 744 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Tsr2Q8C8T8 191 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Tmem143Q8VD26 458 aa15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ppil4Q9CXG3 492 aaKnown RBP15.88■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Zfp804bA0A0G2JGH6 1343 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ddx19aQ61655 478 aaKnown RBP15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Gimap8Q75N62 688 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Fam160b2Q80YR2 744 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Rps6kb1Q8BSK8 525 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Usp44Q8C2S0 711 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Sugp2Q8CH09 1067 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Gpatch11Q3UFS4 262 aa15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Utp3Q9JI13 469 aaKnown RBP15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Mad1l1Q9WTX8 717 aaKnown RBP15.87■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Plch1Q4KWH5 1682 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Npy5rO70342 466 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Pdcl2Q78Y63 240 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Serpina10Q8R121 448 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Gja10Q9WUS4 505 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Psma5Q9Z2U1 241 aaKnown RBP15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Irgm2A0A140LIF8 407 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Pram1Q6BCL1 675 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 AidaQ8C4Q6 305 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 SnrkQ8VDU5 748 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Dpf1Q9QX66 387 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Lgr5Q9Z1P4 907 aa15.86■□□□□ 0.13
Rnf4-204ENSMUST00000182047 1700029H14RikE9PY36 240 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Hand2Q61039 217 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ufl1Q8CCJ3 793 aaKnown RBP15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Cchcr1Q8K2I2 770 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Foxo3Q9WVH4 672 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Hmg20bQ9Z104 317 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Col22a1E9Q7P1 1613 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Cyp2d9P11714 504 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Casz1Q9CWL2 1761 aa15.85■□□□□ 0.13
Rnf4-204ENSMUST00000182047 RtcbQ99LF4 505 aaKnown RBP15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 CoblQ5NBX1 1337 aaKnown RBP15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Prl3d1P18121 224 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 GalcP54818 684 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Ttc14Q9CSP9 761 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Tbc1d7Q9D0K0 293 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Gm4340L7N2C4 268 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Casp1P29452 402 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Adcy5P84309 1262 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Pla2g4fQ50L41 855 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Polr3gQ6NXY9 223 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Tmem67Q8BR76 992 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Shisa4Q8CA71 197 aa15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Smc3Q9CW03 1217 aaKnown RBP15.84■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Setdb1O88974 1307 aa15.83■□□□□ 0.13
Rnf4-204ENSMUST00000182047 Speer4dL7N216 212 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 CgnP59242 1191 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Lmod1Q8BVA4 595 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ccdc158Q8CDI6 1109 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Eva1cP58659 440 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 IntuQ059U7 942 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Chrna2Q91X60 512 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Glipr1l2Q9CQ35 332 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ube3bQ9ES34 1070 aa15.83■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Spty2d1Q68FG3 682 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ccar2Q8VDP4 922 aaKnown RBP15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ppp4r3bQ922R5 820 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Znfx1Q8R151 1909 aaKnown RBP15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 GabrdP22933 449 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 DpydQ8CHR6 1025 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Riok1Q922Q2 567 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Appbp2Q9DAX9 585 aa15.82■□□□□ 0.12
Rnf4-204ENSMUST00000182047 1700006A11RikB9EHI3 544 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Cyp2d34L7N463 504 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ppfia3P60469 1194 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Ctdnep1Q3TP92 244 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Kiaa0753Q6A000 959 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Cfap44E9Q5M6 1843 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Bach2P97303 839 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Anp32cQ64G17 123 aa15.81■□□□□ 0.12
Rnf4-204ENSMUST00000182047 Stx6Q9JKK1 255 aa15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 85.5 ms