RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Neurod6P48986 337 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 LyarQ08288 388 aaKnown RBP17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Arglu1Q3UL36 271 aaKnown RBP17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ddx46Q569Z5 1032 aaKnown RBP17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ncoa4Q5U4H9 625 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Mns1Q61884 491 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Pms1Q8K119 917 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 ChmQ9QXG2 665 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 Sh3bp5Q9Z131 463 aa17.03■□□□□ 0.32
Vcan-205ENSMUST00000159337 AW822073A0A0N4SUK1 652 aa17.02■□□□□ 0.32
Vcan-205ENSMUST00000159337 Srek1Q8BZX4 494 aaKnown RBP17.02■□□□□ 0.32
Vcan-205ENSMUST00000159337 Ankrd1Q9CR42 319 aa17.02■□□□□ 0.32
Vcan-205ENSMUST00000159337 Wdr19Q3UGF1 1341 aa17.02■□□□□ 0.32
Vcan-205ENSMUST00000159337 Sall1Q9ER74 1322 aa17.02■□□□□ 0.32
Vcan-205ENSMUST00000159337 Anp32eP97822 260 aaKnown RBP17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Morc2aQ69ZX6 1030 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Prdm4Q80V63 803 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ncaph2Q8BSP2 607 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Atad2Q8CDM1 1040 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Yeats4Q9CR11 227 aaKnown RBP17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Cfap99A0A140LIX9 648 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ccdc102aQ3TMW1 549 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 GpkowQ56A08 488 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Abcf1Q6P542 837 aaKnown RBP17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Dis3l2Q8CI75 870 aaKnown RBP17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Hps3Q91VB4 1002 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Rbm33Q9CXK9 1231 aaKnown RBP17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Clic4Q9QYB1 253 aa17.01■□□□□ 0.31
Vcan-205ENSMUST00000159337 Grin2dQ03391 1323 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Gm43638A0A0J9YU36 694 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ppfia3P60469 1194 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 NpeppsQ11011 920 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Jarid2Q62315 1234 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Kri1Q8VDQ9 704 aaKnown RBP17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Terf2ipQ91VL8 393 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Fam76aQ922G2 307 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Filip1Q9CS72 1211 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Rrs1Q9CYH6 365 aaKnown RBP17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Pus3Q9JI38 481 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Cyp2d10P24456 504 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Tpm4Q6IRU2 248 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Tada3Q8R0L9 432 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Stk38Q91VJ4 465 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Stxbp4Q9WV89 557 aa17■□□□□ 0.31
Vcan-205ENSMUST00000159337 Lcmt1A0A0U1RNF2 332 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Cyp2d34L7N463 504 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 NmiO35309 314 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 GmnnO88513 206 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Mrvi1Q9WUX5 899 aaKnown RBP16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Lmtk3Q5XJV6 1424 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Adamtsl3G3UXC7 1706 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Usp42B2RQC2 1324 aaKnown RBP16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Kif3cO35066 796 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Dnajc2P54103 621 aaKnown RBP16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Sptlc2P97363 560 aaKnown RBP16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Rtel1Q0VGM9 1203 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ccdc129Q14B48 1034 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Vps18Q8R307 973 aa16.99■□□□□ 0.31
Vcan-205ENSMUST00000159337 Bin1O08539 588 aaKnown RBP16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Nlrp1aQ2LKU9 1182 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Iqsec3Q3TES0 1195 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Uri1Q3TLD5 531 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ripor2Q80U16 1078 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Dhx38Q80X98 1228 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Zfp202Q8C879 641 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Rassf4Q8CB96 322 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Alg3Q8K2A8 438 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Mtmr6Q8VE11 617 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Pes1Q9EQ61 584 aaKnown RBP16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 MypnQ5DTJ9 1315 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ccng2O08918 344 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Slc1a4O35874 532 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Hspd1P63038 573 aaKnown RBP16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 ZyxQ62523 564 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ccdc155Q80VJ8 648 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Kcnh5Q920E3 988 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Nek3Q9R0A5 511 aa16.98■□□□□ 0.31
Vcan-205ENSMUST00000159337 Siglec1Q62230 1695 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Sos2Q02384 1333 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Abca3Q8R420 1704 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Nbr1P97432 988 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ppp4r3aQ6P2K6 820 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Q8C5K5 320 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Q8CEZ4 452 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Gimap6Q8K349 305 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Tgs1Q923W1 853 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Dnajc10Q9DC23 793 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 EcsitQ9QZH6 435 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Cdc45Q9Z1X9 566 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 AtrnQ9WU60 1428 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Myo3bQ1EG27 1305 aa16.97■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ttll7A4Q9F0 912 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Actn3O88990 900 aaKnown RBP16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ric8aQ3TIR3 530 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Ccdc34Q3UI66 367 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 SdsQ8VBT2 327 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Simc1E9Q6E9 1354 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Pfkfb1P70266 471 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 Gm28047Q3US59 414 aa16.96■□□□□ 0.31
Vcan-205ENSMUST00000159337 U2af1l4Q8BGJ9 220 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms