RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Tango6Q8C3S2 1079 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Kcnq3Q8K3F6 873 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Slfn1Q9Z0I7 337 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 PatjQ63ZW7 1834 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Map7O88735 730 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 NppbP40753 121 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Trim56Q80VI1 734 aaKnown RBP11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Tmem266Q8BZB3 538 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Sik3Q6P4S6 1311 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Col2a1P28481 1487 aa11.52□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Sptbn5F6UCX4 1208 aa11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Csf1rP09581 977 aa11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Znf692Q3U381 531 aa11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Tfip11Q9ERA6 838 aaKnown RBP11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Tm4sf1Q64302 202 aa11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Carmil3Q3UFQ8 1375 aa11.51□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mdm2P23804 489 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mre11Q61216 706 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Nlrp9aQ66X03 949 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mapk8ip1Q9WVI9 707 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Ppfia1B2RXQ2 1266 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Atp2b3Q0VF55 1220 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mctp2Q5RJH2 878 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Vwa3bJ9JI28 736 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Il15P48346 162 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mrps27Q8BK72 415 aaKnown RBP11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Pla2g12bQ99P27 195 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 AaasP58742 546 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rps8P62242 208 aaKnown RBP11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 CbarpQ66L44 698 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Alx1Q8C8B0 326 aa11.5□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Krt24A1L317 512 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Mboat7Q8CHK3 473 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Trim34bJ3QNR8 485 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Ifit2Q64112 472 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Erc2Q6PH08 957 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 MlphQ91V27 590 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 KnstrnQ9D9Z1 312 aaKnown RBP11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Cyp27a1Q9DBG1 533 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Myh8P13542 1937 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Krt25Q8VCW2 446 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rdm1Q9CQK3 281 aa11.49□□□□□ -0.57
Prpf39-201ENSMUST00000120580 MyrflQ3UN70 904 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Plekho1Q9JIY0 408 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Il4rP16382 810 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Ddx46Q569Z5 1032 aaKnown RBP11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Msl1Q6PDM1 616 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Q8C5K5 320 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 BcanQ61361 883 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Sgsm2Q80U12 1005 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 CpvlQ9D3S9 478 aa11.48□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Slc44a4Q91VA1 707 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Q9D2X8 372 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Hmgb2P30681 210 aaKnown RBP11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rbm26Q6NZN0 1012 aaKnown RBP11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rbm33Q9CXK9 1231 aaKnown RBP11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 UvssaQ9D479 717 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rabep1O35551 862 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Gsdma2Q32M21 443 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Krt40Q6IFX3 439 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Zbed3Q9D0L1 228 aa11.47□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Elmsan1E9Q2I4 1089 aaKnown RBP11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Exosc10P56960 887 aaKnown RBP11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Anapc15P60007 132 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Col1a1P11087 1453 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Sh3tc1G3X9F6 1346 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Ubap1lG3UW59 384 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Nell2Q61220 819 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Rbm15bQ6PHZ5 887 aaKnown RBP11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Ly6iQ9WU67 134 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Myh7bA2AQP0 1941 aa11.46□□□□□ -0.57
Prpf39-201ENSMUST00000120580 Tshz3Q8CGV9 1081 aa11.46□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Aox3G3X982 1335 aa11.46□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Prdm11A2AGX3 565 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Hspd1P63038 573 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Camkk2Q8C078 588 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Smc4Q8CG47 1286 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Trpc5Q9QX29 975 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Ak2Q9WTP6 239 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Zdhhc9P59268 364 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Mrpl50Q8VDT9 159 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Txnrd3Q99MD6 652 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 IcoslgQ9JHJ8 322 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Stk3Q9JI10 497 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Epb41l3Q9WV92 929 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Atrnl1Q6A051 1378 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Pde4bB1AWC9 736 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Mfap1aC0HKD8 439 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Mfap1bC0HKD9 439 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Tnpo1Q8BFY9 898 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Ufl1Q8CCJ3 793 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Tmem143Q8VD26 458 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Gm3893E9Q1I1 302 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Terf2O35144 541 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Lmnb1P14733 588 aaKnown RBP11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Golim4Q8BXA1 655 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Cdca7lQ922M5 438 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 FliiQ9JJ28 1271 aa11.45□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Mast3Q3U214 1321 aa11.44□□□□□ -0.58
Prpf39-201ENSMUST00000120580 Nek11Q8C0Q4 628 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms