RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Taf7Q9R1C0 341 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Igfbp6P47880 238 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ctdnep1Q3TP92 244 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Hook1Q8BIL5 728 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Sgsm1Q8BPQ7 1093 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ttc27Q8CD92 847 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Rassf8Q8CJ96 419 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Pdia6Q922R8 440 aaKnown RBP12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Flt4P35917 1363 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Mybbp1aQ7TPV4 1344 aaKnown RBP12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Zscan29E9Q5B4 869 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 1700113H08RikE9Q9Q5 327 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Neurod6P48986 337 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Irx2P81066 474 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ift57Q8BXG3 429 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Slc39a6Q8C145 765 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 ApobrQ8VBT6 942 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Tlcd1Q99JT6 247 aa12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Psma5Q9Z2U1 241 aaKnown RBP12.59□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Sik1Q60670 779 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ubxn10Q8BG34 277 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Atf7Q8R0S1 413 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Pcdhb15Q91Y04 786 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 4930548H24RikQ9D496 437 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Bag3Q9JLV1 577 aaKnown RBP12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Cdk4P30285 303 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 CenpqQ9CPQ5 267 aa12.58□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Rnf20Q5DTM8 973 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 R3hcc1Q8BSI6 488 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Paf1Q8K2T8 535 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Rmi1Q9D4G9 616 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Cfap58B2RW38 873 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Hspa2P17156 633 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Sp8Q8BMJ8 486 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ubr2Q6WKZ8 1755 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Kiaa0232Q80U59 1396 aaKnown RBP12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 AceP09470 1312 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ccdc38Q8CDN8 563 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 SnrkQ8VDU5 748 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Srgap1Q91Z69 1062 aa12.57□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Zbtb38Q3LR78 1197 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Iqsec3Q3TES0 1195 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Exoc5Q3TPX4 708 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Atp1a3Q6PIC6 1013 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Lrrc8aQ80WG5 810 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Rps6kb1Q8BSK8 525 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 TefQ9JLC6 301 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Zfp317Q8C0Q5 607 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Otud6bQ8K2H2 294 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Apbb1ipQ8R5A3 670 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Mast2Q60592 1734 aa12.56□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Kcnh4A2A5F7 1018 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Cct2P80314 535 aaKnown RBP12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ube2oQ6ZPJ3 1288 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ankrd23Q812A3 306 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Tsen34Q8BMZ5 316 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Stat1P42225 749 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 L1td1Q587J6 782 aaKnown RBP12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Cap2Q9CYT6 476 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Lrp6O88572 1613 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Atp8b3Q6UQ17 1335 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ttll7A4Q9F0 912 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Usp28Q5I043 1051 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ppm1mQ8BU27 406 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Rhot2Q8JZN7 620 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Pes1Q9EQ61 584 aaKnown RBP12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Osbpl5Q9ER64 874 aa12.55□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Aox1O54754 1333 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Klhl34A2AI76 644 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ercc3P49135 783 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Csrnp1P59054 583 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ica1lQ3TY65 431 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Slu7Q8BHJ9 585 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Cntnap1O54991 1385 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Irgm2A0A140LIF8 407 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Dnaaf2Q8BPI1 814 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Pm20d1Q8C165 503 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ccer1Q9CQL2 403 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Col4a1P02463 1669 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Fer1l6E0CZ42 1862 aa12.54□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ddb1Q3U1J4 1140 aaKnown RBP12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Zmynd15Q8C0R7 736 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Kcnk13Q8R1P5 405 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ankrd49Q8VE42 238 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ddx41Q91VN6 622 aaKnown RBP12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Aox4Q3TYQ9 1336 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Bsdc1Q80Y55 427 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ano10Q8BH79 659 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Ubxn4Q8VCH8 506 aa12.53□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Atp2b1G5E829 1220 aa12.52□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Bin1O08539 588 aaKnown RBP12.52□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Zkscan4Q5SZT6 480 aa12.52□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Bmp2kQ91Z96 1138 aa12.52□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Crb1Q8VHS2 1405 aa12.52□□□□□ -0.4
Prpf40b-202ENSMUST00000118287 Samsn1P57725 372 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 GpkowQ56A08 488 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Adora1Q60612 326 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 RbsnQ80Y56 783 aa12.52□□□□□ -0.41
Prpf40b-202ENSMUST00000118287 Elf2Q9JHC9 593 aa12.52□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 373.1 ms