RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Ccdc33Q3ULW6 985 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Mctp2Q5RJH2 878 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Trak1Q6PD31 939 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Cavin4A2AMM0 362 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Cfdp1O88271 295 aaKnown RBP6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Lig3P97386 1015 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Drc1Q3USS3 753 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Ttc19Q8CC21 365 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Cul5Q9D5V5 780 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 CarsQ9ER72 831 aaKnown RBP6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Irgm2A0A140LIF8 407 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Gsta4P24472 222 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Sept2P42208 361 aaKnown RBP6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Prdm1Q60636 856 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Rabep2Q91WG2 554 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Catsper1Q91ZR5 686 aa6.84□□□□□ -1.31
Vcan-203ENSMUST00000109546 Gimap9G3X987 291 aa6.84□□□□□ -1.32
Vcan-203ENSMUST00000109546 Psme1P97371 249 aa6.84□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ift88Q61371 824 aa6.84□□□□□ -1.32
Vcan-203ENSMUST00000109546 KaznQ69ZS8 779 aa6.84□□□□□ -1.32
Vcan-203ENSMUST00000109546 Haus2Q9CQS9 234 aa6.84□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rbm27Q5SFM8 1060 aaKnown RBP6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pfdn1Q9CWM4 122 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ccdc28aQ8CEI3 192 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pank3Q8R2W9 370 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 CacybpQ9CXW3 229 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ttc21aQ8C0S4 1314 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cd72P21855 354 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Scaf1Q5U4C3 1256 aaKnown RBP6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Arhgap10Q6Y5D8 786 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Sos2Q02384 1333 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Dapk1Q80YE7 1442 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Mink1Q9JM52 1308 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rab34Q64008 259 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Zbtb41Q811F1 908 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Tsnaxip1Q99P25 704 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Angptl3Q9R182 455 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Kdm2bQ6P1G2 1309 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Serpinc1P32261 465 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Nom1Q3UFM5 854 aaKnown RBP6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Tmtc1Q3UV71 942 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Stx6Q9JKK1 255 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Msl1Q6PDM1 616 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rtl9Q32KG4 1339 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rab11fip4Q8BQP8 635 aa6.83□□□□□ -1.32
Vcan-203ENSMUST00000109546 Lire1P11260 357 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Hddc2Q3SXD3 199 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Mrps22Q9CXW2 359 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Atp8b3Q6UQ17 1335 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pfdn4Q3UWL8 134 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pak3Q61036 559 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Taco1Q8K0Z7 294 aaKnown RBP6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ttc1Q91Z38 292 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Trim71Q1PSW8 855 aaKnown RBP6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 NapgQ9CWZ7 312 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Flot2Q60634 428 aaKnown RBP6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ublcp1Q8BGR9 318 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Nkiras1Q8CEC5 192 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 LgsnQ8CIX8 563 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Speer2E9Q9U2 264 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Khdrbs1Q60749 443 aaKnown RBP6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Klhl31Q8BWA5 634 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Exoc1Q8R3S6 894 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Bloc1s2Q9CWG9 143 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Dnaaf1Q9D2H9 634 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 GsnP13020 780 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Kifap3P70188 793 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Trpc6Q61143 930 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pnpla2Q8BJ56 486 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cfap36Q8C6E0 343 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pank1Q8K4K6 548 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pex19Q8VCI5 299 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Stk3Q9JI10 497 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Zscan10Q3URR7 782 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cep70Q6IQY5 616 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Amotl1Q9D4H4 968 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Cfap73J3QPZ5 306 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ubl4bQ9CQ84 188 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Axin1O35625 863 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Nlrp4fQ66X05 959 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Krt72Q6IME9 520 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Irak4Q8R4K2 459 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Trim12aQ99PQ1 284 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Mrpl44Q9CY73 333 aaKnown RBP6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rgs3Q9DC04 966 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pi16Q9ET66 489 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Gkap1Q9JMB0 366 aa6.82□□□□□ -1.32
Vcan-203ENSMUST00000109546 Brd1E9PZ26 1189 aaKnown RBP6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Trim34bJ3QNR8 485 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Taf4E9QAP7 1042 aaKnown RBP6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Exoc5Q3TPX4 708 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Pspc1Q8R326 523 aaKnown RBP6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Ankrd2Q9WV06 328 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Lcmt1A0A0U1RNF2 332 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Btn2a2A4QPC6 514 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Apol10bG3X9K7 334 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Parp2O88554 559 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Krt14Q61781 484 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 Rab3ipQ68EF0 428 aa6.81□□□□□ -1.32
Vcan-203ENSMUST00000109546 SpertQ32MG2 446 aa6.81□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 80 ms