RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Gm30191A0A0U1RNT7 187 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 LdhaP06151 332 aaKnown RBP11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Gm4981Q3ULJ8 291 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ddx19aQ61655 478 aaKnown RBP11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Pim2Q62070 370 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ubac1Q8VDI7 409 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Psrc1Q9D0P7 329 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Pde4aO89084 844 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Gjc1P28229 396 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Azi2Q9QYP6 405 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Uso1Q9Z1Z0 959 aaKnown RBP11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 PrxO55103 1391 aa11.92□□□□□ -0.5
Rtn3-204ENSMUST00000088171 NpcdF8VQB8 469 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Card10P58660 1021 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Znf335A2A5K6 1337 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Tagap1P0CAX8 505 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Serpinc1P32261 465 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Fgfr1opQ66JX5 399 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Iffo1Q8BXL9 562 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Stac3Q8BZ71 360 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Mrpl44Q9CY73 333 aaKnown RBP11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ppp1r9aH3BJD6 1292 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ppfibp2O35711 882 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Asic1Q6NXK8 526 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ano2Q8CFW1 1002 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Krt20Q9D312 431 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 4933406M09RikG3XA12 479 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ssfa2Q922B9 1252 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Tacc2Q9JJG0 1149 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Ncoa3O09000 1398 aa11.91□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Csrnp1P59054 583 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Maats1Q8BRC6 783 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Fndc3aQ8BX90 1198 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 HmcesQ8R1M0 353 aaKnown RBP11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Smarca5Q91ZW3 1051 aaKnown RBP11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Pcf11G3X9Z4 1553 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Kifap3P70188 793 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Iqsec3Q3TES0 1195 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Kiaa1024Q8K3V7 917 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Vps16Q920Q4 839 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Rpl13P47963 211 aaKnown RBP11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Fam47cQ14BE7 430 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Trpc3Q9QZC1 836 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 TchpQ3TVW5 497 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 WaplQ65Z40 1200 aaKnown RBP11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Kiaa1841Q68FF0 718 aa11.9□□□□□ -0.5
Rtn3-204ENSMUST00000088171 Prex2Q3LAC4 1598 aa11.9□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ctnna3Q65CL1 895 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Sec63Q8VHE0 760 aaKnown RBP11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Fam114a1Q9D281 569 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Cfap70D3YVL2 1141 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Eddm13E9Q7F5 164 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Dnm1P39053 867 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Tfcp2l1Q3UNW5 479 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Sik1Q60670 779 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Uba5Q8VE47 403 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Taf7lQ9D3R9 471 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 CltaO08585 235 aa11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Rrp1P56183 494 aaKnown RBP11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 SrrtQ99MR6 875 aaKnown RBP11.89□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Zscan25B2RX31 543 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Pram1Q6BCL1 675 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Lin9Q8C735 542 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ddx27Q921N6 760 aaKnown RBP11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Fsip1Q9D3V5 435 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Wdr17E9Q271 1322 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Fyb2A2A995 729 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Sh2d4bA6X942 431 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 MarcksP26645 309 aaKnown RBP11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Abi1Q8CBW3 481 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 DymQ8CHY3 669 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Slc18a1Q8R090 521 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Homer2Q9QWW1 354 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Dapk3O54784 448 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Myl3P09542 204 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 NyxP83503 476 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Itga6Q61739 1091 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Akap7Q7TN79 314 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Cracr2bQ80ZJ8 394 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Pik3ap1Q9EQ32 811 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Prrc2bQ7TPM1 1486 aaKnown RBP11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Gm21985Q6P6P5 1106 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 DcpsQ9DAR7 338 aa11.88□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Apol10bG3X9K7 334 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Atp2b1G5E829 1220 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Depdc1bQ8BH88 529 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Exoc1Q8R3S6 894 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 CtsqQ91ZF4 343 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 NapaQ9DB05 295 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Rnf17Q99MV7 1640 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Depdc5P61460 1591 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ppfia1B2RXQ2 1266 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Gbp8Q2V6D6 525 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Pla2g4fQ50L41 855 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Ccdc57Q6PHN1 1016 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 CpvlQ9D3S9 478 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Atf7ipQ7TT18 1306 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 PalldQ9ET54 1408 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Stat1P42225 749 aa11.87□□□□□ -0.51
Rtn3-204ENSMUST00000088171 Nlrx1Q3TL44 975 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms