RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Rfc1P35601 1131 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Zkscan4Q5SZT6 480 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Ncoa4Q5U4H9 625 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Zbtb40Q6PCS8 1258 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 CerkQ8K4Q7 531 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Map3k2Q61083 619 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Fam114a1Q9D281 569 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Prl7a2O54831 253 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Frat1P70339 274 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Il1rapl2Q9ERS6 686 aa9.67□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Sos2Q02384 1333 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Wnt7aP24383 349 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Samsn1P57725 372 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Ica1lQ3TY65 431 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Larp1Q6ZQ58 1072 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Tada3Q8R0L9 432 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Top1mtQ8R4U6 593 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Fer1l6E0CZ42 1862 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Rc3h1Q4VGL6 1130 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Tns3Q5SSZ5 1440 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Edrf1Q6GQV7 1239 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Atp1a3Q6PIC6 1013 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Sec62Q8BU14 398 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Odf2lQ9D478 642 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Clic4Q9QYB1 253 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Map3k13Q1HKZ5 959 aa9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 PtmsQ9D0J8 101 aaKnown RBP9.66□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Clec11aO88200 328 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Rrp1P56183 494 aaKnown RBP9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Glis3Q6XP49 780 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Ano1Q8BHY3 960 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Tgs1Q923W1 853 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Dock2Q8C3J5 1828 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Arhgef16Q3U5C8 713 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 Mia3Q8BI84 1930 aa9.65□□□□□ -0.86
Pcdh9-201ENSMUST00000068992 LtkP08923 888 aa9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 EzrP26040 586 aaKnown RBP9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Cers3Q1A3B0 383 aa9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 L1td1Q587J6 782 aaKnown RBP9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Fhod1Q6P9Q4 1197 aa9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Q8CEZ4 452 aa9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Srgap1Q91Z69 1062 aa9.65□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Duox1A2AQ92 1551 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Vmn2r78K7N6U5 853 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Grin1P35438 938 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Amigo3Q8C2S7 508 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 PigbQ9JJQ0 542 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Tshz1Q5DTH5 1084 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Trim56Q80VI1 734 aaKnown RBP9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Sf3a1Q8K4Z5 791 aaKnown RBP9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Hsd3b7Q9EQC1 369 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Elf2Q9JHC9 593 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Myo5aQ99104 1853 aaKnown RBP9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Btbd11Q6GQW0 1109 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Q8BZJ8 459 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Rasal3Q8C2K5 1041 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Atf7Q8R0S1 413 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 GckrQ91X44 587 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Uap1Q91YN5 522 aa9.64□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Znf609Q8BZ47 1413 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 1700019A02RikA0A087WPV9 146 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Vps54Q5SPW0 977 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Ranbp6Q8BIV3 1105 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Spata16Q8C636 571 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Taf6lQ8R2K4 616 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 UtrnE9Q6R7 3430 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Usp42B2RQC2 1324 aaKnown RBP9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Hoxa7P02830 229 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Pald1P70261 859 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Iqcb1Q8BP00 598 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Frmpd3A0A140LIW3 1774 aa9.63□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Zfp597E9Q6S0 419 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Pcdhb14Q6PB90 796 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Sash3Q8K352 380 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 CenpqQ9CPQ5 267 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Pdzd9Q9D9M4 266 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 TrdnE9Q9K5 693 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Grm8P47743 908 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Atp6v1dP57746 247 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Slc20a2Q80UP8 656 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Phc3Q8CHP6 981 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Tdo2P48776 406 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Usp48Q3V0C5 1052 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Ppp1r10Q80W00 888 aaKnown RBP9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Pabpn1Q8CCS6 302 aaKnown RBP9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Ltb4r2Q9JJL9 360 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 MetP16056 1379 aa9.62□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Slc1a4O35874 532 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Arl8aQ8VEH3 186 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Xpo4Q9ESJ0 1151 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 EcsitQ9QZH6 435 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Eif2ak3Q9Z2B5 1114 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Znf568E9PYI1 671 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Adam6bQ6IMH7 756 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Cep135Q6P5D4 1140 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Slitrk3Q810B9 980 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Lrrfip2Q91WK0 415 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Lmbr1lQ9D1E5 489 aa9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Bag3Q9JLV1 577 aaKnown RBP9.61□□□□□ -0.87
Pcdh9-201ENSMUST00000068992 Mad1l1Q9WTX8 717 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms