RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 RdxP26043 583 aaKnown RBP17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Cdkn1cP49919 348 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Sparcl1P70663 650 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 ErmnQ5EBJ4 281 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Kcna6Q61923 529 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 TfrcQ62351 763 aaKnown RBP17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Kiaa0754Q69ZZ9 979 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Trim59Q922Y2 403 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ubr2Q6WKZ8 1755 aa17.01■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ank1Q02357 1862 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Pramel3A2AHA7 463 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gm7903A2AWL1 463 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 AV320801A2AWL3 467 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gm15023L7MUB4 467 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Morc2aQ69ZX6 1030 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ppp4r3aQ6P2K6 820 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Dhx40Q6PE54 779 aaKnown RBP17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ube2oQ6ZPJ3 1288 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Dnaaf2Q8BPI1 814 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Kcnk13Q8R1P5 405 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Vmn2r23E9PXI5 849 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ints5Q8CHT3 1018 aa17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Usp42B2RQC2 1324 aaKnown RBP17■□□□□ 0.31
Msx3-201ENSMUST00000055353 Clec11aO88200 328 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 XpcP51612 930 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Fbxo2Q80UW2 297 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Flad1Q8R123 492 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Rufy2Q8R4C2 606 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 BrapQ99MP8 591 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Clic4Q9QYB1 253 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Lrrc8aQ80WG5 810 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 AidaQ8C4Q6 305 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 4930572O03RikQ8C5Y0 211 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ttc19Q8CC21 365 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Terf2ipQ91VL8 393 aa16.99■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gm29094F6Q785 221 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Myd88P22366 296 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Fam102bQ8BQS4 339 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Trim52Q8CDV4 233 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Krt25Q8VCW2 446 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 MthfsQ9D110 203 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Cwc25Q9DBF7 416 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Col4a3bpQ9EQG9 624 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Sos2Q02384 1333 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 Slit1Q80TR4 1531 aa16.98■□□□□ 0.31
Msx3-201ENSMUST00000055353 AK157302I3ITR1 129 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 CebpaP53566 359 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ric1Q69ZJ7 1422 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 CtifQ6PEE2 600 aaKnown RBP16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Atad2Q8CDM1 1040 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ccer1Q9CQL2 403 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Isca1Q9D924 129 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 AtrnQ9WU60 1428 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Eya2O08575 532 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Stx1aO35526 288 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Mtx1P47802 317 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 BcanQ61361 883 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Asap2Q7SIG6 958 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Tmem59lQ7TNI2 337 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Stard3nlQ9DCI3 235 aa16.97■□□□□ 0.31
Msx3-201ENSMUST00000055353 Bin1O08539 588 aaKnown RBP16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Anxa1P10107 346 aaKnown RBP16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ankib1Q6ZPS6 1085 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Eif3bQ8JZQ9 803 aaKnown RBP16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ubxn4Q8VCH8 506 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ssfa2Q922B9 1252 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 TnksQ6PFX9 1320 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gm45140A0A0N4SUM8 220 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Rrp1P56183 494 aaKnown RBP16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ehd2Q8BH64 543 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gpatch3Q8BIY1 525 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 SdsQ8VBT2 327 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Ccne2Q9Z238 404 aa16.96■□□□□ 0.31
Msx3-201ENSMUST00000055353 Gm21680A0A0G2JGR8 267 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 Nfatc2ipO09130 412 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 U2af1l4Q8BGJ9 220 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 Ano10Q8BH79 659 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 Unc13bQ9Z1N9 1602 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 Txnrd1Q9JMH6 613 aa16.95■□□□□ 0.3
Msx3-201ENSMUST00000055353 Frat1P70339 274 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Slu7Q8BHJ9 585 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Sec62Q8BU14 398 aaKnown RBP16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Dnajc14Q921R4 703 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Ubn2Q80WC1 1314 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Abca15E9PWH4 1668 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Zscan29E9Q5B4 869 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Prl3d2F6R3P9 224 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Q8BZJ8 459 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 CerkQ8K4Q7 531 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Sept12Q9D451 317 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Nwd2Q6P5U7 1742 aa16.94■□□□□ 0.3
Msx3-201ENSMUST00000055353 Ncaph2Q8BSP2 607 aa16.93■□□□□ 0.3
Msx3-201ENSMUST00000055353 LyarQ08288 388 aaKnown RBP16.93■□□□□ 0.3
Msx3-201ENSMUST00000055353 Gsdma2Q32M21 443 aa16.93■□□□□ 0.3
Msx3-201ENSMUST00000055353 Zkscan4Q5SZT6 480 aa16.93■□□□□ 0.3
Msx3-201ENSMUST00000055353 MlecQ6ZQI3 291 aaKnown RBP16.93■□□□□ 0.3
Msx3-201ENSMUST00000055353 Cep135Q6P5D4 1140 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Rdm1Q9CQK3 281 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Npc1l1Q6T3U4 1333 aa16.92■□□□□ 0.3
Msx3-201ENSMUST00000055353 Pald1P70261 859 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms