RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Slain2Q8CI08 581 aa11.44□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Cfap99A0A140LIX9 648 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Nfatc2ipO09130 412 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Dync1i1O88485 628 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Exosc10P56960 887 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Tmc2Q8R4P4 888 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 SdsQ8VBT2 327 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Krt25Q8VCW2 446 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gm29094F6Q785 221 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 LyarQ08288 388 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Nlrp1aQ2LKU9 1182 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Taf3Q5HZG4 932 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ppp4r3aQ6P2K6 820 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ehd2Q8BH64 543 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Slc5a1Q8C3K6 665 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 MthfsQ9D110 203 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Usp42B2RQC2 1324 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Vmn2r23E9PXI5 849 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 L1td1Q587J6 782 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zbtb40Q6PCS8 1258 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ift57Q8BXG3 429 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Luzp1Q8R4U7 1068 aaKnown RBP11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Stard3nlQ9DCI3 235 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 IncenpQ9WU62 880 aa11.43□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Adam1aQ60813 791 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Trim59Q922Y2 403 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Myd88P22366 296 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Cdca8Q8BHX3 289 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Flad1Q8R123 492 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ncoa5Q91W39 579 aaKnown RBP11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Mrps25Q9D125 171 aaKnown RBP11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zbtb21E9Q444 1094 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ankib1Q6ZPS6 1085 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Otud6bQ8K2H2 294 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Cwc25Q9DBF7 416 aa11.42□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Shank2Q80Z38 1476 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Zhx1P70121 873 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Atad2Q8CDM1 1040 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Xpo4Q9ESJ0 1151 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Fbxl16A2RT62 479 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Slc4a1P04919 929 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Nbr1P97432 988 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 ZyxQ62523 564 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 TnksQ6PFX9 1320 aa11.41□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Znf568E9PYI1 671 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Eya2O08575 532 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Anxa1P10107 346 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 CebpaP53566 359 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 4930572O03RikQ8C5Y0 211 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gigyf1Q99MR1 1044 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 CenpqQ9CPQ5 267 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Tbc1d7Q9D0K0 293 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Elf2Q9JHC9 593 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ltb4r2Q9JJL9 360 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Sec62Q8BU14 398 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Shisa4Q8CA71 197 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ddx27Q921N6 760 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Dnajc14Q921R4 703 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gli3Q61602 1583 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Sos2Q02384 1333 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Gsdma2Q32M21 443 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Ncaph2Q8BSP2 607 aa11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Eif3bQ8JZQ9 803 aaKnown RBP11.4□□□□□ -0.58
Ccdc40-202ENSMUST00000053440 Tjp1P39447 1745 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Gm21680A0A0G2JGR8 267 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Prdm1Q60636 856 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Frat2Q8K025 231 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Col4a1P02463 1669 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Samsn1P57725 372 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Sptlc2P97363 560 aaKnown RBP11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Fam170aQ66LM6 333 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Morc2aQ69ZX6 1030 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tmem59lQ7TNI2 337 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 RgmbQ7TQ33 436 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Cep55Q8BT07 462 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 CerkQ8K4Q7 531 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Lrrc2Q8VDB8 371 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Dnajc25A2ALW5 357 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Gas2l3Q3UWW6 683 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Asap2Q7SIG6 958 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Smc4Q8CG47 1286 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Mei1Q9D4I2 1268 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Stxbp4Q9WV89 557 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tns2Q8CGB6 1400 aa11.39□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Tcof1O08784 1320 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Itga6Q61739 1091 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Acnat2Q8BGG9 420 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Fsd2Q8BZ52 692 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Rdm1Q9CQK3 281 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 4930548H24RikQ9D496 437 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Sil1Q9EPK6 465 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Siglec1Q62230 1695 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Fam102bQ8BQS4 339 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Dnaaf4Q8R368 420 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Naa16Q9DBB4 864 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Cdc45Q9Z1X9 566 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Surf1P09925 306 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Card10P58660 1021 aa11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Srek1Q8BZX4 494 aaKnown RBP11.38□□□□□ -0.59
Ccdc40-202ENSMUST00000053440 Zfp202Q8C879 641 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms