RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Zbtb40Q6PCS8 1258 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ccdc82Q6PG04 518 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Tmem87aQ8BXN9 555 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Hnrnpul1Q8VDM6 859 aaKnown RBP17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Frat1P70339 274 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Frmd3Q8BHD4 595 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Dnajc14Q921R4 703 aa17.51■□□□□ 0.39
Nup54-201ENSMUST00000038514 Sall1Q9ER74 1322 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Surf1P09925 306 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Kcnd1Q03719 651 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ccer1Q9CQL2 403 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Telo2Q9DC40 840 aaKnown RBP17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ythdc1E9Q5K9 736 aaKnown RBP17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Timm10P62073 90 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Taf3Q5HZG4 932 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Zranb3Q6NZP1 1069 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Trim52Q8CDV4 233 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Alg3Q8K2A8 438 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Terf2ipQ91VL8 393 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ssfa2Q922B9 1252 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Vps33aQ9D2N9 598 aa17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Pes1Q9EQ61 584 aaKnown RBP17.5■□□□□ 0.39
Nup54-201ENSMUST00000038514 Anks1aP59672 1150 aa17.49■□□□□ 0.39
Nup54-201ENSMUST00000038514 CenpqQ9CPQ5 267 aa17.49■□□□□ 0.39
Nup54-201ENSMUST00000038514 Efcab2Q9CQ46 164 aa17.49■□□□□ 0.39
Nup54-201ENSMUST00000038514 Pramel3A2AHA7 463 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Gm7903A2AWL1 463 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 AV320801A2AWL3 467 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Gm15023L7MUB4 467 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 AidaQ8C4Q6 305 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Rbm17Q8JZX4 405 aaKnown RBP17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Krt25Q8VCW2 446 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ddx41Q91VN6 622 aaKnown RBP17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Mei1Q9D4I2 1268 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Wdr19Q3UGF1 1341 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Lmod3E9QA62 571 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 LyarQ08288 388 aaKnown RBP17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Shisa4Q8CA71 197 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Rdm1Q9CQK3 281 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Fam50bQ9WTJ8 334 aa17.48■□□□□ 0.39
Nup54-201ENSMUST00000038514 Tiam2Q6ZPF3 1715 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Gm21698A0A087WQP8 267 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Gm29094F6Q785 221 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Gm21671G3UY31 267 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Itga6Q61739 1091 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 MthfsQ9D110 203 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Clic4Q9QYB1 253 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Vmn2r23E9PXI5 849 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ercc3P49135 783 aa17.47■□□□□ 0.39
Nup54-201ENSMUST00000038514 Cfap99A0A140LIX9 648 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Prl3d2F6R3P9 224 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Ltv1Q6NSQ7 470 aaKnown RBP17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Asap2Q7SIG6 958 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Trim56Q80VI1 734 aaKnown RBP17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Tmem67Q8BR76 992 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Kiaa1524Q8BWY9 907 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Luzp1Q8R4U7 1068 aaKnown RBP17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Hps3Q91VB4 1002 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Fam84aQ9D650 292 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Tulp1Q9Z273 543 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Flad1Q8R123 492 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Xpo4Q9ESJ0 1151 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Carmil3Q3UFQ8 1375 aa17.46■□□□□ 0.39
Nup54-201ENSMUST00000038514 Eya2O08575 532 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Slc4a1P04919 929 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Pald1P70261 859 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Spty2d1Q68FG3 682 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Tmem59lQ7TNI2 337 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 SdsQ8VBT2 327 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Farp2Q91VS8 1065 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Zkscan5Q9Z1D8 819 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Zfp142G5E869 1843 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Card10P58660 1021 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Kcna6Q61923 529 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 U2af1l4Q8BGJ9 220 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Tmem266Q8BZB3 538 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Srek1Q8BZX4 494 aaKnown RBP17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Stk38Q91VJ4 465 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Nop2Q922K7 793 aaKnown RBP17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Cwc25Q9DBF7 416 aa17.45■□□□□ 0.38
Nup54-201ENSMUST00000038514 Znf568E9PYI1 671 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 AK157302I3ITR1 129 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Panx2Q6IMP4 677 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Yeats4Q9CR11 227 aaKnown RBP17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ppil4Q9CXG3 492 aaKnown RBP17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Odf2lQ9D478 642 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 4930548H24RikQ9D496 437 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Isca1Q9D924 129 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Cdc45Q9Z1X9 566 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Myh7Q91Z83 1935 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ccng2O08918 344 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ess2O70279 479 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Tpm1P58771 284 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 4930572O03RikQ8C5Y0 211 aa17.44■□□□□ 0.38
Nup54-201ENSMUST00000038514 Gsdma2Q32M21 443 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ehd4Q9EQP2 541 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Elf2Q9JHC9 593 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Ltb4r2Q9JJL9 360 aa17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 Sptlc2P97363 560 aaKnown RBP17.43■□□□□ 0.38
Nup54-201ENSMUST00000038514 GnpatP98192 678 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms