RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Pramel3A2AHA7 463 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Gm7903A2AWL1 463 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 AV320801A2AWL3 467 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Gm15023L7MUB4 467 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 FntaQ61239 377 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Sox30Q8CGW4 782 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 BrapQ99MP8 591 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Myo1cQ9WTI7 1063 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Grin2dQ03391 1323 aa20.55■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Rbbp8nlA2ABX0 614 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Ric8aQ3TIR3 530 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Fsd1Q7TPM6 496 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Stk38Q91VJ4 465 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Scn7aB1AYL1 1681 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 PtprvP70289 1705 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Bcl2l13P59017 434 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Hspa4Q61316 841 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Rufy2Q8R4C2 606 aa20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Cwc15Q9JHS9 229 aaKnown RBP20.54■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Prl7a2O54831 253 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Kri1Q8VDQ9 704 aaKnown RBP20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Tgs1Q923W1 853 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Clic4Q9QYB1 253 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Col1a2Q01149 1372 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Klra1P20937 262 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 LyarQ08288 388 aaKnown RBP20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 LarsQ8BMJ2 1178 aa20.53■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Cfap99A0A140LIX9 648 aa20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Plcb3P51432 1234 aaKnown RBP20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 HellsQ60848 821 aa20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Srek1Q8BZX4 494 aaKnown RBP20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Ptcd1Q8C2E4 695 aaKnown RBP20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Zfp202Q8C879 641 aa20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Gnl2Q99LH1 728 aaKnown RBP20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Flt4P35917 1363 aa20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 PsapQ61207 557 aaKnown RBP20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 Gm21985Q6P6P5 1106 aa20.52■□□□□ 0.88
Sqstm1-201ENSMUST00000015981 A0A1L1SQF0 893 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 LtkP08923 888 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Bag1Q60739 355 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Btbd11Q6GQW0 1109 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Rad17Q6NXW6 688 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ppp2r2cQ8BG02 447 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Pms1Q8K119 917 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Tmc2Q8R4P4 888 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Rrs1Q9CYH6 365 aaKnown RBP20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 MicalclQ9D5U9 680 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Pes1Q9EQ61 584 aaKnown RBP20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Tulp1Q9Z273 543 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Gng11P61953 73 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ctnna3Q65CL1 895 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Tmem132eQ6IEE6 982 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Brd3Q8K2F0 726 aaKnown RBP20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Amotl1Q9D4H4 968 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Pde3aQ9Z0X4 1141 aa20.51■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Rsrc2A2RTL5 376 aaKnown RBP20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Specc1lQ2KN98 1118 aaKnown RBP20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ehd2Q8BH64 543 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Filip1Q9CS72 1211 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Gm43638A0A0J9YU36 694 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Diaph1O08808 1255 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Sptlc2P97363 560 aaKnown RBP20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 DbnlQ62418 436 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Irf9Q61179 399 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ppp1r18Q8BQ30 594 aa20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Zcchc17Q9ESX4 241 aaKnown RBP20.5■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 BcorQ8CGN4 1759 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Wdr17E9Q271 1322 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Gm3409A0A0G2JE67 319 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Gdap1l1Q8VE33 370 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Terf2ipQ91VL8 393 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Lmbr1lQ9D1E5 489 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 RargP18911 458 aaKnown RBP20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Neurod6P48986 337 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Exosc10P56960 887 aaKnown RBP20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Mb21d2Q8C525 428 aa20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Yeats4Q9CR11 227 aaKnown RBP20.49■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Dnajc25A2ALW5 357 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Tmco3Q8BH01 678 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Nek9Q8K1R7 984 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Prc1Q99K43 603 aaKnown RBP20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Nek3Q9R0A5 511 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Usp13Q5BKP2 858 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Recql4Q75NR7 1216 aaKnown RBP20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Cd209bQ8CJ91 325 aa20.48■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Myo1aO88329 1043 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Pfkfb1P70266 471 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Ddx46Q569Z5 1032 aaKnown RBP20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 PsdQ5DTT2 1024 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Jarid2Q62315 1234 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Iqcb1Q8BP00 598 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Spata16Q8C636 571 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Evc2Q8K1G2 1220 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 NefhP19246 1090 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Vps54Q5SPW0 977 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Bicdl2Q8CHW5 507 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Dpf1Q9QX66 387 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Large1Q9Z1M7 756 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 C3P01027 1663 aa20.47■□□□□ 0.87
Sqstm1-201ENSMUST00000015981 Myo3bQ1EG27 1305 aa20.46■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms