RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 OR14K1Q8NGZ2 314 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 SLC25A40Q8TBP6 338 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 ISOC1Q96CN7 298 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 MARS2Q96GW9 593 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 OR2J1Q9GZK6 312 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 RBM38Q9H0Z9 239 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 ZNF442Q9H7R0 627 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 NEK6Q9HC98 313 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 CRIM1Q9NZV1 1036 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 RNF115Q9Y4L5 304 aa13.63□□□□□ -0.23
TRAFD1-203ENST00000547063 TRBV5-7A0A0A0MS05 114 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 PRSS44E7EML9 344 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 THBS4P35443 961 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 GNALP38405 381 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 CTF1Q16619 201 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 MOGQ16653 247 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 MEX3BQ6ZN04 569 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 KBTBD8Q8NFY9 601 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 KLF14Q8TD94 323 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 RPL3LQ92901 407 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 FGGYQ96C11 551 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 HAVCR1Q96D42 359 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 CMBLQ96DG6 245 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 NAA50Q9GZZ1 169 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 TCF7L1Q9HCS4 588 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 NOX4Q9NPH5 578 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 FOXJ3Q9UPW0 622 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 PIGLQ9Y2B2 252 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 ATP23Q9Y6H3 246 aa13.62□□□□□ -0.23
TRAFD1-203ENST00000547063 TRAV1-2A0A0B4J238 106 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 CD300LBA8K4G0 201 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 DEFB108AA8MXU0 73 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 H3BSH0 61 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 ZNF250P15622 560 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 FSTP19883 344 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 ANOS1P23352 680 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 PPP3R1P63098 170 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 SRSF1Q07955 248 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 SPOCK1Q08629 439 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 HLXQ14774 488 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 SPATA46Q5T0L3 261 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 USP43Q70EL4 1123 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 TPRA1Q86W33 373 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 TECTBQ96PL2 329 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 CENPOQ9BU64 300 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 ABCB9Q9NP78 766 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 CA10Q9NS85 328 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 SNTG1Q9NSN8 517 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 KCNN3Q9UGI6 736 aa13.61□□□□□ -0.23
TRAFD1-203ENST00000547063 UBR5O95071 2799 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 MEGF11A6BM72 1044 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ANKRD30BLA7E2S9 258 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 PDCD5O14737 125 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ERCC1P07992 297 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 FAHP16930 419 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 SRMP19623 302 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 KITLGP21583 273 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 MTNR1BP49286 362 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 FABP6P51161 128 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 PSMD7P51665 324 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ERVS71-1P61550 626 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 VBP1P61758 197 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 INSL4Q14641 139 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 CLVS2Q5SYC1 327 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 UTS2BQ765I0 119 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 TMEM171Q8WVE6 324 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 PIGTQ969N2 578 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 C12orf43Q96C57 262 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 PIK3IP1Q96FE7 263 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 CHST5Q9GZS9 411 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 SLC22A4Q9H015 551 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 POFUT1Q9H488 388 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ZCCHC4Q9H5U6 513 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 MRPL15Q9P015 296 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 GPR160Q9UJ42 338 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 NOP16Q9Y3C1 178 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 CADP27708 2225 aa13.6□□□□□ -0.23
TRAFD1-203ENST00000547063 ANKRD61A6NGH8 418 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 IQCF6A8MYZ5 107 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 SHISA9B4DS77 424 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 H3BMQ9 156 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 ALX3O95076 343 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 CST4P01036 141 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 IGHV3-13P01766 116 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 OCMP0CE72 109 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 RAB3AP20336 220 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms