RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GALNSP34059 522 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DCDP81605 110 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DEFA6Q01524 100 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FAM209AQ5JX71 171 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 PRSS35Q8N3Z0 413 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GALNT16Q8N428 558 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 RBMXL1Q96E39 390 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 TCEAL7Q9BRU2 100 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF2Q9BSG1 426 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FKRPQ9H9S5 495 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 B4GALT7Q9UBV7 327 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FOXJ3Q9UPW0 622 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 IGHV3-64DA0A0J9YX35 117 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ZGLP1P0C6A0 271 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF85Q03923 595 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 DHRS2Q13268 280 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 IKZF1Q13422 519 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SHBQ15464 509 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 RABEPKQ7Z6M1 372 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 OR52N5Q8NH56 324 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SAP25Q8TEE9 199 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 CPNE4Q96A23 557 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 MOGAT1Q96PD6 335 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SLC25A31Q9H0C2 315 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 EXOSC3Q9NQT5 275 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 MTFP1Q9UDX5 166 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 PCDHB10Q9UN67 800 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 MED12Q93074 2177 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ZFP92A6NM28 416 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ERVH48-1M5A8F1 160 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 YKT6O15498 198 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 QDPRP09417 244 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GDF1P27539 372 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FCGR2CP31995 323 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GPR85P60893 370 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FLI1Q01543 452 aaPredicted RBP8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FMODQ06828 376 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 EGR3Q06889 387 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 ECH1Q13011 328 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 LTC4SQ16873 150 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SLC25A30Q5SVS4 291 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SEZ6L2Q6UXD5 910 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 AAED1Q7RTV5 226 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 PSMF1Q92530 271 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 FBXW5Q969U6 566 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GCM1Q9NP62 436 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 TUBG2Q9NRH3 451 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 GPR173Q9NS66 373 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 OR14J1Q9UGF5 321 aa8.94□□□□□ -0.98
TRAF1-202ENST00000540010 SERPINA7P05543 415 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ADRA2AP08913 450 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 RAC2P15153 192 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 RPS15P62841 145 aaKnown RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 SIGLEC14Q08ET2 396 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 KIAA0141Q14154 515 aaPredicted RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 CD226Q15762 336 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF74Q16587 644 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 PGAP1Q75T13 922 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 SUCNR1Q9BXA5 334 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 MMP25Q9NPA2 562 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 CLDN16Q9Y5I7 305 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 NSG1A0A0A6YYJ2 146 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 TRAPPC2LH3BP13 241 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 H7C1Q1 480 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ADAM11O75078 769 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 UBE2NP61088 152 aaKnown RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 PCK2Q16822 640 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 DMKNQ6E0U4 476 aaPredicted RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 RHBDD2Q6NTF9 364 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 PWWP2BQ6NUJ5 590 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 LSMEM1Q8N8F7 131 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 CLRN3Q8NCR9 226 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 OR1N1Q8NGS0 311 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 SGK3Q96BR1 496 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 GJE1A6NN92 205 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 TOX3O15405 576 aaPredicted RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 EIF4E2O60573 245 aaKnown RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 IFNA4P05014 189 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ABOP16442 354 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 HAGHQ16775 308 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ABHD17BQ5VST6 288 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 TMEM182Q6ZP80 229 aaPredicted RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 OR9K2Q8NGE7 335 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 OR51A4Q8NGJ6 313 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 OR10AC1Q8NH08 325 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 OTOSQ8NHW6 89 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 NANPQ8TBE9 248 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF721Q8TF20 911 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 ZNF75AQ96N20 296 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 NIPSNAP3BQ9BS92 247 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 NXF2Q9GZY0 626 aaKnown RBP8.93□□□□□ -0.98
TRAF1-202ENST00000540010 TXNIPQ9H3M7 391 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 NELFAQ9H3P2 528 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 FN3KRPQ9HA64 309 aa8.93□□□□□ -0.98
TRAF1-202ENST00000540010 CACNA1GO43497 2377 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 DNAH14Q0VDD8 3507 aa8.92□□□□□ -0.98
TRAF1-202ENST00000540010 IGHV5-10-1A0A0J9YXX1 117 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms