RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 DERL3Q96Q80 235 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 S100A13Q99584 98 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PAPOLGQ9BWT3 736 aaKnown RBP9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 RNF167Q9H6Y7 350 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PLGRKTQ9HBL7 147 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 NKIRAS2Q9NYR9 191 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 KCNN3Q9UGI6 736 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 GPR160Q9UJ42 338 aa9.21□□□□□ -0.94
TNFRSF1A-211ENST00000538363 HEATR1Q9H583 2144 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 TRBV5-5A0A0J9YX44 114 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 A0A1W2PPW3 197 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ANKRD61A6NGH8 418 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ATP6V1G2-DDX39BF2Z307 99 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SMPD2O60906 423 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 NRASP01111 189 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 UCHL1P09936 223 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZNF35P13682 527 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 FAHP16930 419 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 GRNP28799 593 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SDC2P34741 201 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 THBS4P35443 961 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 DDOSTP39656 456 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 WNT5AP41221 380 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 MTNR1BP49286 362 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 HGFACQ04756 655 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 BSPH1Q075Z2 132 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 GK2Q14410 553 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CNN3Q15417 329 aaKnown RBP9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CTF1Q16619 201 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 KRTAP27-1Q3LI81 207 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 BEX5Q5H9J7 111 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 FAM27D1Q5T7N8 215 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 GLT8D1Q68CQ7 371 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CD200R1LQ6Q8B3 271 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 UNQ9370/PRO34162Q6UXP9 181 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 TMEM91Q6ZNR0 172 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SLC16A12Q6ZSM3 486 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 RFPL4BQ6ZWI9 263 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRSS45Q7RTY3 260 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CROCCP3Q8IVE0 287 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 OR5AS1Q8N127 324 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 JAGN1Q8N5M9 183 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 BHLHE23Q8NDY6 225 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 OR51A4Q8NGJ6 313 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 OR8S1Q8NH09 359 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 NDNFQ8TB73 568 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SYNPRQ8TBG9 265 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 RPS4Y2Q8TD47 263 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PP6455Q8WZ26 134 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ITFG2Q969R8 447 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 C10orf35Q96D05 121 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CPNE2Q96FN4 548 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZNF75AQ96N20 296 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 OR2J1Q9GZK6 312 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 TAS2R4Q9NYW5 299 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 NPAP1Q9NZP6 1156 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZNF319Q9P2F9 582 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CMAHPQ9Y471 501 aa9.2□□□□□ -0.94
TNFRSF1A-211ENST00000538363 HELZ2Q9BYK8 2649 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZNF816-ZNF321PA0A0X1KG74 233 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 A0A1B0GTI1 187 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 FAM230AA0A1W2PPH8 454 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 LOC390937A0A1W2PQ73 354 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PLSCR5A0PG75 271 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SMIM30A4D0T7 59 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 DPRXA6NFQ7 191 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CD300LBA8K4G0 201 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRSS44E7EML9 344 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 LMX1BO60663 402 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 IL1AP01583 271 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 THBDP07204 575 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 RAC2P15153 192 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRKACBP22694 351 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 BDKRB2P30411 391 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CALCRP30988 508 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CCKARP32238 428 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 TGFBR1P36897 503 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 RPS11P62280 158 aaKnown RBP eCLIP9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRR20EP86478 221 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRR20CP86479 221 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRR20DP86480 221 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRR20BP86481 221 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PRR20AP86496 221 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 FAM3AP98173 230 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SPOCK1Q08629 439 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 SPCS2Q15005 226 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CNPY1Q3B7I2 92 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 CLVS2Q5SYC1 327 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 IDNKQ5T6J7 187 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PLCXD3Q63HM9 321 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 OR2T2Q6IF00 324 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 MZT2AQ6P582 158 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 MEX3BQ6ZN04 569 aaKnown RBP9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 COLCA1Q6ZS62 124 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 MYPOPQ86VE0 399 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 ZNF101Q8IZC7 436 aa9.19□□□□□ -0.94
TNFRSF1A-211ENST00000538363 PNLDC1Q8NA58 520 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms