RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, human

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM41-206	ENST00000514219	TCF7L1	Q9HCS4	588 aa		13.78	□□□□□ -0.2
TRIM41-206	ENST00000514219	GPR84	Q9NQS5	396 aa		13.78	□□□□□ -0.2
TRIM41-206	ENST00000514219	N6AMT1	Q9Y5N5	214 aa		13.78	□□□□□ -0.2
TRIM41-206	ENST00000514219	TRBV5-5	A0A0J9YX44	114 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	MEGF11	A6BM72	1044 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	DPPA5	A6NC42	116 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	MAGEB3	O15480	346 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SMPD2	O60906	423 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	CD3E	P07766	207 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC2A1	P11166	492 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	RAC2	P15153	192 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SSTR2	P30874	369 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SOX6	P35712	828 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	KIR2DL3	P43628	341 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	CAPZA1	P52907	286 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	RPS25	P62851	125 aa	Known RBP	13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	MAP1A	P78559	2803 aa	Predicted RBP	13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	TFF3	Q07654	80 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	MZT1	Q08AG7	82 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	DOC2B	Q14184	412 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF718	Q3SXZ3	478 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	ALKBH2	Q6NS38	261 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	FBXW12	Q6X9E4	464 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	NKAIN3	Q8N8D7	197 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC7A6	Q92536	515 aa		13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	SF3B6	Q9Y3B4	125 aa	Known RBP	13.77	□□□□□ -0.21
TRIM41-206	ENST00000514219	CACNA1C	Q13936	2221 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	TRAV1-2	A0A0B4J238	106 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	GGT3P	A6NGU5	568 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	P2RY10	O00398	339 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	SC5D	O75845	299 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	IGLV3-1	P01715	115 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	UCHL1	P09936	223 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	FST	P19883	344 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	NR4A1	P22736	598 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	THBS4	P35443	961 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	CRYBB2	P43320	205 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	SERPINB10	P48595	397 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	MTNR1B	P49286	362 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219		Q6ZSR3	168 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	PARP16	Q8N5Y8	322 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	PLPP7	Q8NBV4	271 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR1J1	Q8NGS3	322 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	TMIGD2	Q96BF3	282 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	WFIKKN1	Q96NZ8	548 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR14A2	Q96R54	314 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	C1QTNF6	Q9BXI9	259 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	SNTG1	Q9NSN8	517 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	TXNL4B	Q9NX01	149 aa	Known RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	POU2F3	Q9UKI9	436 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	FOXJ3	Q9UPW0	622 aa		13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.76	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219		A6NHS1	94 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	ANKRD30BL	A7E2S9	258 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	IL1A	P01583	271 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	GLRX	P35754	106 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	FABP5	Q01469	135 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	CNN3	Q15417	329 aa	Known RBP	13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR8B8	Q15620	311 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	ODF4	Q2M2E3	257 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	SNAI3	Q3KNW1	292 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	GLYATL3	Q5SZD4	288 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	MBNL2	Q5VZF2	373 aa	Known RBP	13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	SLC22A25	Q6T423	547 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	AP3S1	Q92572	193 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	RNF166	Q96A37	237 aa	Predicted RBP	13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	DERL3	Q96Q80	235 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	MRI1	Q9BV20	369 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	REPIN1	Q9BWE0	567 aa	Known RBP	13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	ZNF442	Q9H7R0	627 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	CYSLTR2	Q9NS75	346 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	KCNN3	Q9UGI6	736 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	CEPT1	Q9Y6K0	416 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219		V9GYS6	101 aa		13.75	□□□□□ -0.21
TRIM41-206	ENST00000514219	hCG_38984	A0A1B0GV85	526 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	CELA3B	P08861	270 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	CCL2	P13500	99 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	RAB3A	P20336	220 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	CALR	P27797	417 aa	Known RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	WNT5A	P41221	380 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	GSK3A	P49840	483 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	BSPH1	Q075Z2	132 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	SNTB2	Q13425	540 aa	Known RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	GK2	Q14410	553 aa	Predicted RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	NCMAP	Q5T1S8	102 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	C22orf42	Q6IC83	251 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	UNQ9370/PRO34162	Q6UXP9	181 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	UTS2B	Q765I0	119 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	PIGT	Q969N2	578 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	SGK3	Q96BR1	496 aa		13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	RBM38	Q9H0Z9	239 aa	Known RBP	13.74	□□□□□ -0.21
TRIM41-206	ENST00000514219	OR51E2	Q9H255	320 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms