RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	SNX5	Q9Y5X3	404 aa		4.21	□□□□□ -1.74
LMNB1-208	ENST00000504788	CR1	P17927	2039 aa		4.21	□□□□□ -1.74
LMNB1-208	ENST00000504788	IGKV1-9	A0A0C4DH69	117 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TRBV5-5	A0A0J9YX44	114 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	LOC100289279	A0A1B0GTE1	492 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	SHISA3	A0PJX4	238 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	DHRS7C	A6NNS2	312 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	CD300LB	A8K4G0	201 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788		B9A039	149 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788		H0YL77	283 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788		J3QLW9	94 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	PIN1P1	O15428	100 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	XRCC2	O43543	280 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	DHRS3	O75911	302 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	NCR1	O76036	304 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	RPP14	O95059	124 aa	Known RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	LCAT	P04180	440 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TFAP2A	P05549	437 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF19	P17023	458 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	LOR	P23490	312 aa	Predicted RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ATP6V1E1	P36543	226 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TGFBR2	P37173	567 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	LIPA	P38571	399 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	GSK3A	P49840	483 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	FABP6	P51161	128 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	INSL4	Q14641	139 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR2T2	Q6IF00	324 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	RPL22L1	Q6P5R6	122 aa	Known RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF773	Q6PK81	442 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	UNQ9370/PRO34162	Q6UXP9	181 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TMEM91	Q6ZNR0	172 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	RNF144B	Q7Z419	303 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TGIF2LY	Q8IUE0	185 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	PHC2	Q8IXK0	858 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	C11orf53	Q8IXP5	236 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	STX19	Q8N4C7	294 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF283	Q8N7M2	679 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	YIPF7	Q8N8F6	280 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR56B2P	Q8NGI1	322 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR13C5	Q8NGS8	318 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	OR51E1	Q8TCB6	317 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	HPSE2	Q8WWQ2	592 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	MYDGF	Q969H8	173 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	CMBL	Q96DG6	245 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ITPKC	Q96DU7	683 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ADAT3	Q96EY9	351 aa	Predicted RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	TRMT61A	Q96FX7	289 aa	Known RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	REEP6	Q96HR9	211 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	LURAP1	Q96LR2	239 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	COG8	Q96MW5	612 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	NR1H4	Q96RI1	486 aa	Predicted RBP	4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	SYT3	Q9BQG1	590 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	MND1	Q9BWT6	205 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	RGCC	Q9H4X1	137 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788		Q9H521	79 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	ISYNA1	Q9NPH2	558 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	BRD7	Q9NPI1	651 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	GPR84	Q9NQS5	396 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	CBLN4	Q9NTU7	201 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	SCN3B	Q9NY72	215 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	PTTG3P	Q9NZH4	202 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	GNG8	Q9UK08	70 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	IKZF2	Q9UKS7	526 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	MAST4	O15021	2626 aa		4.2	□□□□□ -1.74
LMNB1-208	ENST00000504788	CUBN	O60494	3623 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	FLNA	P21333	2647 aa	Known RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	ANK3	Q12955	4377 aa	Known RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	IGKV1-27	A0A075B6S5	117 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788		A0A096LNT2	108 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	TRBV5-7	A0A0A0MS05	114 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	LOC107986453	A0A1B0GWG9	222 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	P2RY10	O00398	339 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	INMT	O95050	263 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	CST4	P01036	141 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	IGHV1-46	P01743	117 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	APOC1	P02654	83 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	MT-ND5	P03915	603 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	ANXA2	P07355	339 aa	Known RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	CD55	P08174	381 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	TACSTD2	P09758	323 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	SELE	P16581	610 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	CPE	P16870	476 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	JUNB	P17275	347 aa	Predicted RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	HSD11B1	P28845	292 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	ALDH3B1	P43353	468 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	SLC6A9	P48067	706 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	PPOX	P50336	477 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	KLF3	P57682	345 aa	Predicted RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	GUCA2A	Q02747	115 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	MLLT11	Q13015	90 aa	Predicted RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	MRPL28	Q13084	256 aa	Known RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	GPR50	Q13585	617 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	TESK1	Q15569	626 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	UBE2V2	Q15819	145 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	ZNF718	Q3SXZ3	478 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	C20orf204	Q6ZNR8	217 aa		4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.19	□□□□□ -1.74
LMNB1-208	ENST00000504788	KLHL36	Q8N4N3	616 aa		4.19	□□□□□ -1.74

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