RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 EBAG9O00559 213 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 LMO1P25800 156 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 GMFBP60983 142 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 MEP1BQ16820 701 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 PCK2Q16822 640 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 VMACQ2NL98 169 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 KRT77Q7Z794 578 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 C11orf65Q8NCR3 313 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 OR5AU1Q8NGC0 362 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 TMEM239Q8WW34 195 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 SLC7A6OSQ96CW6 309 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-214ENST00000465269 MEGF9Q9H1U4 602 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-214ENST00000465269 SPAG4Q9NPE6 437 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 TRIM36Q9NQ86 728 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 HIF3AQ9Y2N7 669 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
HDAC6-214ENST00000465269 FRAS1Q86XX4 4008 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 FAM220BPB1ANY3 271 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-214ENST00000465269 J3QW42 95 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 GYG2O15488 501 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 PTBP3O95758 552 aaKnown RBP12.06□□□□□ -0.48
HDAC6-214ENST00000465269 LHBP01229 141 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 GSK3BP49841 420 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 BLCAPP62952 87 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 ECH1Q13011 328 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 FHL1Q13642 323 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-214ENST00000465269 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 LNX2Q8N448 690 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 FAM156AQ8NDB6 213 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 SDR9C7Q8NEX9 313 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 OR2T12Q8NG77 320 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 C8orf46Q8TAG6 207 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 ABCD2Q9UBJ2 740 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 RPS6KA6Q9UK32 745 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 COA3Q9Y2R0 106 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-214ENST00000465269 AP3M1Q9Y2T2 418 aa12.06□□□□□ -0.48
HDAC6-214ENST00000465269 GSTA4O15217 222 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 FAHP16930 419 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 PIN1Q13526 163 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-214ENST00000465269 MESTQ5EB52 335 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 ERICH5Q6P6B1 374 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 C10orf99Q6UWK7 81 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 ADAMTSL5Q6ZMM2 481 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 COLCA1Q6ZS62 124 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 LINC00482Q8N8I6 264 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 LIPHQ8WWY8 451 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 Q96M85 177 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 KCTD14Q9BQ13 255 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-214ENST00000465269 THTPAQ9BU02 230 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 C1orf21Q9H246 121 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 EVA1AQ9H8M9 152 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 SNTG1Q9NSN8 517 aa12.05□□□□□ -0.48
HDAC6-214ENST00000465269 TCRBV4S1A1TA0A5B7 111 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 A6NIZ1 184 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 F5H5K5 113 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 NDUFB3O43676 98 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 SYNGR1O43759 233 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 ATP5HO75947 161 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 ACSM4P0C7M7 580 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 LYL1P12980 280 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 NCK1P16333 377 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 CRYBA2P53672 197 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 TAS2R41P59536 307 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 RAP1BP61224 184 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 RAP1AP62834 184 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 CSNK2BP67870 215 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 CNN3Q15417 329 aaKnown RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 C11orf91Q3C1V1 193 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 NCR3LG1Q68D85 454 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 PGAP1Q75T13 922 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 C11orf53Q8IXP5 236 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 ACOT11Q8WXI4 607 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 DPF1Q92782 380 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 MYDGFQ969H8 173 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 PRR25Q96S07 402 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 BTBD10Q9BSF8 475 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 WACQ9BTA9 647 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 PRSS22Q9GZN4 317 aa12.04□□□□□ -0.48
HDAC6-214ENST00000465269 METTL8Q9H825 291 aaKnown RBP12.04□□□□□ -0.48
HDAC6-214ENST00000465269 CD300AQ9UGN4 299 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms