RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NAV3Q8IVL0 2385 aa14.58□□□□□ -0.08
SCAMP4-204ENST00000414057 ABCA2Q9BZC7 2435 aa14.58□□□□□ -0.08
SCAMP4-204ENST00000414057 ACOD1A6NK06 481 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 B9A039 149 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 LOC110117498-PIK3R3F6TDL0 507 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ARL6IP5O75915 188 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 F12P00748 615 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 IGKV3-15P01624 115 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 IGLV1-44P01699 117 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 B4GALT1P15291 398 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 PSMA6P60900 246 aaKnown RBP14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 SWI5Q1ZZU3 235 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ELFN2Q5R3F8 820 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 SPATC1Q76KD6 591 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 SLC16A14Q7RTX9 510 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 LRRC18Q8N456 261 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ZNF676Q8N7Q3 588 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ATF6BQ99941 703 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 PDCD1LG2Q9BQ51 273 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ATPIF1Q9UII2 106 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 TIMM10BQ9Y5J6 103 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 TMEM269A0A1B0GVZ9 245 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 RER1O15258 196 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 CECR9P0C854 216 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 MTNR1BP49286 362 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 RPS11P62280 158 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 LOXL1Q08397 574 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 LSAMPQ13449 338 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 SLC36A2Q495M3 483 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ACSM3Q53FZ2 586 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 WDR38Q5JTN6 314 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 PRIMA1Q86XR5 153 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 PRSS35Q8N3Z0 413 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 ZNF525Q8N782 197 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 NUP37Q8NFH4 326 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 KCNJ15Q99712 375 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 RNF167Q9H6Y7 350 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 MYOZ1Q9NP98 299 aaPredicted RBP14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 YAE1D1Q9NRH1 226 aa14.57□□□□□ -0.08
SCAMP4-204ENST00000414057 NSD1Q96L73 2696 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 FN1P02751 2386 aaKnown RBP14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 ZNF879B4DU55 563 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 NDUFS8O00217 210 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 SGCEO43556 437 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 CLPXO76031 633 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 ISG15P05161 165 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 ERCC1P07992 297 aaPredicted RBP14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 UBCP0CG48 685 aaKnown RBP14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 TGFBR1P36897 503 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 Q499Y3 187 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 ZMAT1Q5H9K5 638 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 UNQ9370/PRO34162Q6UXP9 181 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 CEACAM19Q7Z692 300 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 TPRA1Q86W33 373 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 GPR148Q8TDV2 347 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 NANOS1Q8WY41 292 aaKnown RBP14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 HTRA1Q92743 480 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 SPTSSAQ969W0 71 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 ZNF442Q9H7R0 627 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 G6PC2Q9NQR9 355 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 FAM206AQ9NX38 181 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 OR52A1Q9UKL2 312 aa14.56□□□□□ -0.08
SCAMP4-204ENST00000414057 TRAV1-2A0A0B4J238 106 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 TRBV5-5A0A0J9YX44 114 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 A8MV72 311 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 PNPP00491 289 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 UCHL1P09936 223 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 OR4A8P0C604 315 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 MYL9P24844 172 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 KIR3DL2P43630 455 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 PDLIM4P50479 330 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 IDH3GP51553 393 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 EFNB3Q15768 340 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 MST1LQ2TV78 715 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 CCDC92Q53HC0 331 aaPredicted RBP14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 BCL2L15Q5TBC7 163 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 TMEM244Q5VVB8 128 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 VHLLQ6RSH7 139 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 C10orf105Q8TEF2 133 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 SLC25A46Q96AG3 418 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 DCLRE1CQ96SD1 692 aaKnown RBP14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 SH3GL3Q99963 347 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 MMP27Q9H306 513 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 PLEK2Q9NYT0 353 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 NUFIP1Q9UHK0 495 aaKnown RBP14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 FBXL3Q9UKT7 428 aa14.55□□□□□ -0.08
SCAMP4-204ENST00000414057 CDRT1O95170 752 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 ACHEP22303 614 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 CFL1P23528 166 aaKnown RBP14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 OTX1P32242 354 aaPredicted RBP14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 RPS19P39019 145 aaKnown RBP14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 RORCP51449 518 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 MFGE8Q08431 387 aaPredicted RBP14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 TMEM249Q2WGJ8 235 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 CROCCP3Q8IVE0 287 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 ELMOD2Q8IZ81 293 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 OR2H1Q9GZK4 316 aa14.54□□□□□ -0.08
SCAMP4-204ENST00000414057 SLIRPQ9GZT3 109 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms