RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SNAI3Q3KNW1 292 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 GLYATL3Q5SZD4 288 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 C22orf42Q6IC83 251 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 RGS7BPQ6MZT1 257 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 TPRA1Q86W33 373 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 CROCCP3Q8IVE0 287 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 SERPINA12Q8IW75 414 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 RDH10Q8IZV5 341 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 PIAS4Q8N2W9 510 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 OR1J1Q8NGS3 322 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 LINC01560Q8TB33 94 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 FAM222BQ8WU58 562 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 PP6455Q8WZ26 134 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 PPP1R14AQ96A00 147 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 TMEM106AQ96A25 262 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 SPSB4Q96A44 273 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 ISOC1Q96CN7 298 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 TECTBQ96PL2 329 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 HIST1H2AAQ96QV6 131 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 ABCB9Q9NP78 766 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 ZNF275Q9NSD4 429 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 TXNL4BQ9NX01 149 aaKnown RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 PTTG3PQ9NZH4 202 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 GPR160Q9UJ42 338 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 POU2F3Q9UKI9 436 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 FOXJ3Q9UPW0 622 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 STARD10Q9Y365 291 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 NOP16Q9Y3C1 178 aaKnown RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 KLF2Q9Y5W3 355 aaPredicted RBP7.97□□□□□ -1.13
ACTN1-218ENST00000556343 PCNX1Q96RV3 2341 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 FAM208BQ5VWN6 2430 aa7.97□□□□□ -1.13
ACTN1-218ENST00000556343 NCOA6Q14686 2063 aaPredicted RBP7.96□□□□□ -1.13
ACTN1-218ENST00000556343 TRAV1-2A0A0B4J238 106 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 ANKRD30BLA7E2S9 258 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 J3QKU1 62 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 GOSR1O95249 250 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 THBDP07204 575 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 ERCC1P07992 297 aaPredicted RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 UCHL1P09936 223 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 FAM157BP0CG42 384 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 RAC2P15153 192 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SRMP19623 302 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 CALRP27797 417 aaKnown RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 THBS4P35443 961 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SOX6P35712 828 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SOX2P48431 317 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SERPINB10P48595 397 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 MTNR1BP49286 362 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 LSM3P62310 102 aaKnown RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 TFF3Q07654 80 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 MZT1Q08AG7 82 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 DOC2BQ14184 412 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SLC22A25Q6T423 547 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 NUP37Q8NFH4 326 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SSC4DQ8WTU2 575 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 FGGYQ96C11 551 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 C12orf43Q96C57 262 aaKnown RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 CPNE2Q96FN4 548 aaPredicted RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 DERL3Q96Q80 235 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 OR14A2Q96R54 314 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SLC22A4Q9H015 551 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 OR51B6Q9H340 312 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 NOX4Q9NPH5 578 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SNTG1Q9NSN8 517 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SLC7A11Q9UPY5 501 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 ATP23Q9Y6H3 246 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 V9GYS6 101 aa7.96□□□□□ -1.14
ACTN1-218ENST00000556343 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.14
ACTN1-218ENST00000556343 DIDO1Q9BTC0 2240 aaKnown RBP7.95□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF816-ZNF321PA0A0X1KG74 233 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 A0A1B0GTI1 187 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 TMEM127O75204 238 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 SC5DO75845 299 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 NGFP01138 241 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 IGLV3-1P01715 115 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 RAB3AP20336 220 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 CALCRP30988 508 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 WNT5AP41221 380 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 GSK3AP49840 483 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 VBP1P61758 197 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 RPS11P62280 158 aaKnown RBP eCLIP7.95□□□□□ -1.14
ACTN1-218ENST00000556343 FAM3AP98173 230 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF92Q03936 586 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 HGFACQ04756 655 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 GK2Q14410 553 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-218ENST00000556343 CNN3Q15417 329 aaKnown RBP7.95□□□□□ -1.14
ACTN1-218ENST00000556343 CTF1Q16619 201 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 DGUOKQ16854 277 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 CLVS2Q5SYC1 327 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 NCMAPQ5T1S8 102 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 FBXW12Q6X9E4 464 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 TMEM91Q6ZNR0 172 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 Q6ZSR3 168 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 PAQR4Q8N4S7 273 aaPredicted RBP7.95□□□□□ -1.14
ACTN1-218ENST00000556343 PARP16Q8N5Y8 322 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 OR14K1Q8NGZ2 314 aa7.95□□□□□ -1.14
ACTN1-218ENST00000556343 SLC25A40Q8TBP6 338 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms