RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MCRIP1C9JLW8 97 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 KLRC4-KLRK1H3BQV0 150 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 UPK1BO75841 260 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 BMI1P35226 326 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SPHARQ15513 63 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM95Q3KNT9 176 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 IL17RELQ6ZVW7 336 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 FCRLAQ7L513 359 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 EGLN2Q96KS0 407 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC46A1Q96NT5 459 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NICN1Q9BSH3 213 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 G6PC3Q9BUM1 346 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SLC19A3Q9BZV2 496 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PLEKHB1Q9UF11 243 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 OR2W1Q9Y3N9 320 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PLXNA1Q9UIW2 1896 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 M0R2Z0 102 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 EIF3FO00303 357 aaPredicted RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 WDR1O75083 606 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 SNCGO76070 127 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ENPP1P22413 925 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CA6P23280 308 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CLDN15P56746 228 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 CEBPEQ15744 281 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 PRSS16Q9NQE7 514 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF346Q9UL40 294 aaKnown RBP3□□□□□ -1.93
SYNE2-212ENST00000554584 PSG11Q9UQ72 335 aa3□□□□□ -1.93
SYNE2-212ENST00000554584 NDUFB3O43676 98 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 KLKB1P03952 638 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 PRSS1P07477 247 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 UQCRC2P22695 453 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 SCD5Q86SK9 330 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 NR4A3Q92570 626 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 RASD2Q96D21 266 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TAAR3PQ9P1P4 343 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 HSF4Q9ULV5 492 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 IGLV3-22A0A075B6J6 115 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 GLB1P16278 677 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ORM2P19652 201 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 GABRB3P28472 473 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 CCR2P41597 374 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 C1QL3Q5VWW1 255 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 OR4C11Q6IEV9 310 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 NRARPQ7Z6K4 114 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 BCORP1Q8N888 145 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 MGLLQ99685 303 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 METTL17Q9H7H0 456 aaPredicted RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 LINC00527Q9UJ94 153 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 FBXO7Q9Y3I1 522 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 A0A1B0GTQ1 180 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 B4E171 279 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 GFRA3O60609 400 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 MFAP5Q13361 173 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 DUSP7Q16829 419 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TM4SF20Q53R12 229 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 RHBDD2Q6NTF9 364 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ZDHHC24Q6UX98 284 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 CMTM1Q8IZ96 169 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TPRX1Q8N7U7 411 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TTLQ8NG68 377 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 PTGESO14684 152 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 SLC25A17O43808 307 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 IGHV3-53P01767 116 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 COL9A1P20849 921 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 SP6Q3SY56 376 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 FAAP20Q6NZ36 180 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 NPSR1Q6W5P4 371 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 OR13C5Q8NGS8 318 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TSSK2Q96PF2 358 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 SSU72Q9NP77 194 aaKnown RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 A4GNTQ9UNA3 340 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TRAV20A0A0B4J274 112 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TMPRSS11DO60235 418 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 RAB3DO95716 219 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF25P17030 456 aaPredicted RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ACKR3P25106 362 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TIA1P31483 386 aaKnown RBP eCLIP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 CHRNA7P36544 502 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 CASP7P55210 303 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 IL13RA1P78552 427 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 PQLC3Q8N755 202 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 DMRT1Q9Y5R6 373 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ARHGAP33O14559 1287 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 IGHV4-34P06331 123 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 EMDP50402 254 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TAS2R20P59543 309 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 RPS15AP62244 130 aaKnown RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 GLDNQ6ZMI3 551 aaPredicted RBP2.99□□□□□ -1.93
SYNE2-212ENST00000554584 COMMD1Q8N668 190 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 NPWQ8N729 165 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 OR1N2Q8NGR9 330 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 OR5H6Q8NGV6 325 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ANKUB1A6NFN9 424 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 B4DXG7 233 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 ATG12O94817 140 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 HIST2H2BCQ6DN03 193 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 LSMEM2Q8N112 164 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 TNFRSF13CQ96RJ3 184 aa2.99□□□□□ -1.93
SYNE2-212ENST00000554584 PLEKHA2Q9HB19 425 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms