RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 RAB18Q9NP72 206 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 WIF1Q9Y5W5 379 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 PCNX3Q9H6A9 2034 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 TMED7-TICAM2A0A0A6YYA0 188 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 IGKV1D-43A0A0B4J1Z2 117 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 PLPP3O14495 311 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 FABP1P07148 127 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 LYL1P12980 280 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 GP1BBP13224 206 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 FOLR2P14207 255 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 PTAFRP25105 342 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 CRABP1P29762 137 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 PPT1P50897 306 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 EMP2P54851 167 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 C1orf61Q13536 156 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 FAM209BQ5JX69 171 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 C1orf140Q5VVS0 124 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 DHRS11Q6UWP2 260 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 SMCO4Q9NRQ5 59 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 GPR132Q9UNW8 380 aa12.2□□□□□ -0.46
HDAC7-228ENST00000548938 NPIPB7O75200 414 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
HDAC7-228ENST00000548938 H2BFMP0C1H6 154 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 SMIM6P0DI80 62 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 S100A10P60903 97 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF101Q8IZC7 436 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM104Q8NE00 496 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 LRP4O75096 1905 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 BLACEA4D250 179 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 TTRP02766 147 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 CD5P06127 495 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 FCGR3AP08637 254 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 CPT2P23786 658 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 IL12BP29460 328 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 SLC26A5P58743 744 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 TGIF1Q15583 401 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 ANGPTL5Q86XS5 388 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-228ENST00000548938 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 ADAMTS18Q8TE60 1221 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 TSLPQ969D9 159 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 SLC46A1Q96NT5 459 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 MAP3K3Q99759 626 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 NAA11Q9BSU3 229 aaPredicted RBP12.19□□□□□ -0.46
HDAC7-228ENST00000548938 LPAR5Q9H1C0 372 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 GSN-AS1Q9NRJ2 163 aa12.19□□□□□ -0.46
HDAC7-228ENST00000548938 KIR2DS5A0A0G2JLQ3 304 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 A0A0G2JNG1 304 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 FRG2CA6NGY1 282 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM14DPA8MWL7 114 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 FAM157AC9JC47 383 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 KIR2DS3K7RE56 304 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 SOCS1O15524 211 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 SYT7O43581 403 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 IGHMP01871 453 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF44P15621 663 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 SMCO1Q147U7 214 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 KIR2DS5Q14953 304 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 OR6S1Q8NH40 331 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 AKR1E2Q96JD6 320 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
HDAC7-228ENST00000548938 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 METTL8Q9H825 291 aaKnown RBP12.18□□□□□ -0.46
HDAC7-228ENST00000548938 FAM206AQ9NX38 181 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 PLA2G2EQ9NZK7 142 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 GSKIPQ9P0R6 139 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 TRAV20A0A0B4J274 112 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 A0A1W2PPE3 182 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 C1orf196B1AJZ1 125 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 FBXO24O75426 580 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 RAD51DO75771 328 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 TNFP01375 233 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 PGCP20142 388 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 POLR2GP62487 172 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC7-228ENST00000548938 HGFACQ04756 655 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 FAM76BQ5HYJ3 339 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 BTNL8Q6UX41 500 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 NAA40Q86UY6 237 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 POC1AQ8NBT0 407 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 ADIPOR1Q96A54 375 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 SLC26A1Q9H2B4 701 aa12.18□□□□□ -0.46
HDAC7-228ENST00000548938 B4DGG1 531 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 HTR3BO95264 441 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 MPIG6BO95866 241 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 BCKDHBP21953 392 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
HDAC7-228ENST00000548938 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 OR8U1Q8NH10 309 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 TMEM41AQ96HV5 264 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 KIRREL1Q96J84 757 aa12.17□□□□□ -0.46
HDAC7-228ENST00000548938 ZNF251Q9BRH9 671 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms