RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FFAR1O14842 300 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PAPLNO95428 1278 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SLC2A10O95528 541 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ANXA4P09525 319 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR3A2P47893 321 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SOX2P48431 317 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 METAP1P53582 386 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ACVR1Q04771 509 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 HYAL1Q12794 435 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TSTA3Q13630 321 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PCBP2Q15366 365 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SYPL1Q16563 259 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 DPPA3Q6W0C5 159 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 LRRC69Q6ZNQ3 347 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 BIVMQ86UB2 503 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM86AQ8N2M4 240 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 EDAQ92838 391 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 NEIL2Q969S2 332 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR6C1Q96RD1 312 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF607Q96SK3 696 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PDFQ9HBH1 243 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 NOX4Q9NPH5 578 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF586Q9NXT0 402 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 V9GY05 133 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 USP34Q70CQ2 3546 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 A0A1W2PS29 197 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF860A6NHJ4 632 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CLDN34H7C241 214 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 C1QL1O75973 258 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CST4P01036 141 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ITGB2P05107 769 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 NR2F1P10589 423 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF28P17035 718 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CD33P20138 364 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PCSK1P29120 753 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 BUD31P41223 144 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 MC1RQ01726 317 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 P2RY6Q15077 328 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SNAI3Q3KNW1 292 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM268Q5VZI3 342 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TSTD1Q8NFU3 115 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR51F2Q8NH61 342 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 LKAAEAR1Q8TD35 194 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 GPX8Q8TED1 209 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM186Q96B77 213 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SEH1LQ96EE3 360 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM169Q96HH4 297 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SLC39A8Q9C0K1 460 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PATZ1Q9HBE1 687 aaKnown RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 BPIFA1Q9NP55 256 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SLC17A5Q9NRA2 495 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 HCSTQ9UBK5 93 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 MTFP1Q9UDX5 166 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SRPK3Q9UPE1 567 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 RANBP2P49792 3224 aaKnown RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 IFITM5A6NNB3 132 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 FTCDNL1E5RQL4 147 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 H3BNC9 293 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 PLPP2O43688 288 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 SRPX2O60687 465 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-205ENST00000493587 CTSVO60911 334 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 TOX4O94842 621 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 ALPPL2P10696 532 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 FUT3P21217 361 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 BMP5P22003 454 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 FCARP24071 287 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 CDKN1CP49918 316 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-205ENST00000493587 PPP1R1AQ13522 171 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 EXT1Q16394 746 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 KIAA0895LQ68EN5 471 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 REEP3Q6NUK4 255 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 TCTN3Q6NUS6 607 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 SLC16A9Q7RTY1 509 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 GRASPQ7Z6J2 395 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-205ENST00000493587 RAB8BQ92930 207 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM106AQ96A25 262 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 PDCD1LG2Q9BQ51 273 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 SLC25A51Q9H1U9 297 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM9BQ9NQ34 198 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 NRIP3Q9NQ35 241 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 CYTL1Q9NRR1 136 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 LYRM2Q9NU23 88 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-205ENST00000493587 RYDENQ9NUL5 291 aaKnown RBP6.15□□□□□ -1.42
VPS13B-205ENST00000493587 SLC5A6Q9Y289 635 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
VPS13B-205ENST00000493587 CDHR4A6H8M9 788 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 H7BY64 318 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 APODP05090 189 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 PET100P0DJ07 73 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 TEAD1P28347 426 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 GAS1P54826 345 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 RPL23AP62750 156 aaKnown RBP6.15□□□□□ -1.43
VPS13B-205ENST00000493587 LTBQ06643 244 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 SMAGPQ0VAQ4 97 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 MPV17LQ2QL34 196 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 LINC01551Q86U37 167 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 GKN2Q86XP6 184 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF440Q8IYI8 595 aa6.15□□□□□ -1.43
VPS13B-205ENST00000493587 ZBTB2Q8N680 514 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms