RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SLC30A2Q9BRI3 323 aa18.77■□□□□ 0.6
SMC4-221ENST00000489573 DAPK2Q9UIK4 370 aa18.77■□□□□ 0.6
SMC4-221ENST00000489573 V9GY05 133 aa18.77■□□□□ 0.6
SMC4-221ENST00000489573 FAM208BQ5VWN6 2430 aa18.77■□□□□ 0.6
SMC4-221ENST00000489573 LOC390937A0A1W2PQ73 354 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 CELA3BP08861 270 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 EPXP11678 715 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 GNALP38405 381 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 PPP3R1P63098 170 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 LIX1LQ8IVB5 337 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 ACOT12Q8WYK0 555 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 AKAP1Q92667 903 aaKnown RBP eCLIP18.76■□□□□ 0.594e-24■■■■■ 140.6
SMC4-221ENST00000489573 PRRC2CQ9Y520 2896 aaKnown RBP18.76■□□□□ 0.59
SMC4-221ENST00000489573 CTDSP2O14595 271 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 PEX19P40855 299 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 PSMD7P51665 324 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 TIMM23BQ5SRD1 257 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 MZT2AQ6P582 158 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 OR5D14Q8NGL3 314 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 ELOVL5Q9NYP7 299 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 JKAMPQ9P055 326 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 SLC25A15Q9Y619 301 aa18.76■□□□□ 0.59
SMC4-221ENST00000489573 A6NIN4 97 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 DHRS7CA6NNS2 312 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 RGS5O15539 181 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 AGFG2O95081 481 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 IGKV3-15P01624 115 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 INHBBP09529 407 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 SLC2A2P11168 524 aaPredicted RBP18.75■□□□□ 0.59
SMC4-221ENST00000489573 ATF1P18846 271 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 THBS2P35442 1172 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 DDOSTP39656 456 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 MYPOPQ86VE0 399 aaPredicted RBP18.75■□□□□ 0.59
SMC4-221ENST00000489573 PAQR4Q8N4S7 273 aaPredicted RBP18.75■□□□□ 0.59
SMC4-221ENST00000489573 DNAAF1Q8NEP3 725 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 STEAP2Q8NFT2 490 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 S100ZQ8WXG8 99 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 SPSB4Q96A44 273 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 S100PBPQ96BU1 408 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 CDH20Q9HBT6 801 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 MOV10Q9HCE1 1003 aaKnown RBP18.75■□□□□ 0.59
SMC4-221ENST00000489573 CMAHPQ9Y471 501 aa18.75■□□□□ 0.59
SMC4-221ENST00000489573 SPTA1P02549 2419 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 MEGF11A6BM72 1044 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 IFITM5A6NNB3 132 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 AIPO00170 330 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 CCL21O00585 134 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 TMEM127O75204 238 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 THBS4P35443 961 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 ZNF92Q03936 586 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 MRPL49Q13405 166 aaKnown RBP18.74■□□□□ 0.59
SMC4-221ENST00000489573 DYNC1I2Q13409 638 aaKnown RBP18.74■□□□□ 0.59
SMC4-221ENST00000489573 DDI2Q5TDH0 399 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 PGAP1Q75T13 922 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 FAM169BQ8N8A8 192 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 OR1M1Q8NGA1 313 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 OR51A2Q8NGJ7 313 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 C10orf35Q96D05 121 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 AKIP1Q9NQ31 210 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 COMMD3Q9UBI1 195 aa18.74■□□□□ 0.59
SMC4-221ENST00000489573 hCG_38984A0A1B0GV85 526 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 WNT5AP41221 380 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 SPOCK1Q08629 439 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 MALLQ13021 153 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 C1QTNF12Q5T7M4 302 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 ZNF529Q6P280 563 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 NKAIN3Q8N8D7 197 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 SEMA6DQ8NFY4 1073 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 CEP19Q96LK0 163 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 C1QTNF6Q9BXI9 259 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 ACTR6Q9GZN1 396 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 ABCB9Q9NP78 766 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 TBCCD1Q9NVR7 557 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 PIGLQ9Y2B2 252 aa18.73■□□□□ 0.59
SMC4-221ENST00000489573 J3QW42 95 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 IGLV1-44P01699 117 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 BMP4P12644 408 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 RAB3AP20336 220 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 FAM27E3Q08E93 113 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 HES5Q5TA89 166 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 GLT8D1Q68CQ7 371 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 LAX1Q8IWV1 398 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 OR13C9Q8NGT0 318 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 WDFY2Q96P53 400 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 HMG20AQ9NP66 347 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 ABRACLQ9P1F3 81 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 CLDN25C9JDP6 229 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 NGFP01138 241 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 FAHP16930 419 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 BDKRB2P30411 391 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 MAP2K3P46734 347 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 GSK3AP49840 483 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 FAM3AP98173 230 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 RIPPLY1Q0D2K3 151 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 RFPL4BQ6ZWI9 263 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 ZNF101Q8IZC7 436 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 MFSD4AQ8N468 514 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 PP6455Q8WZ26 134 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 WDR12Q9GZL7 423 aaKnown RBP18.72■□□□□ 0.59
SMC4-221ENST00000489573 MIXL1Q9H2W2 232 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms