RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	FAM210B	Q96KR6	192 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	TSSK3	Q96PN8	268 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	OR5B12	Q96R08	314 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	NRTN	Q99748	197 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	COA1	Q9GZY4	146 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	UGT1A10	Q9HAW8	530 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	LYRM4	Q9HD34	91 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	LZTFL1	Q9NQ48	299 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF226	Q9NYT6	803 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF282	Q9UDV7	671 aa	Predicted RBP	2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	PCYOX1	Q9UHG3	505 aa		2.73	□□□□□ -1.97
VPS8-223	ENST00000485024	CENPJ	Q9HC77	1338 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	SPTBN1	Q01082	2364 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ARPC4-TTLL3	A0A0A6YYG9	625 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF816-ZNF321P	A0A0X1KG74	233 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	TMEM120B	A0PK00	339 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	FAM231B	A6NCW3	169 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	SCAMP2	O15127	329 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	AKR7A2	O43488	359 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	NPIPB7	O75200	414 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	HSBP1	O75506	76 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	CLDN11	O75508	207 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	UTP20	O75691	2785 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	AIFM1	O95831	613 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	IGHV4-34	P06331	123 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ACSM4	P0C7M7	580 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	UBC	P0CG48	685 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF250	P15622	560 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	FUT3	P21217	361 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RPS5	P46782	204 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	VSX2	P58304	361 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	NUTF2	P61970	127 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RPS21	P63220	83 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	TMED1	Q13445	227 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ITIH4	Q14624	930 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	IL17A	Q16552	155 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	SGCA	Q16586	387 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	SOHLH1	Q5JUK2	328 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	CROCC	Q5TZA2	2017 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	HDDC2	Q7Z4H3	204 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	C6orf120	Q7Z4R8	191 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RALGPS2	Q86X27	583 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	TGIF2LY	Q8IUE0	185 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RNF175	Q8N4F7	328 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	FAM71E2	Q8N5Q1	922 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	C8orf31	Q8N9H6	132 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	OR5K2	Q8NHB8	316 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	DTX3L	Q8TDB6	740 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ASB8	Q9H765	288 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RPF2	Q9H7B2	306 aa	Known RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	PXMP2	Q9NR77	195 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	FAM49B	Q9NUQ9	324 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	PTTG3P	Q9NZH4	202 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	ZNF629	Q9UEG4	869 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	KCNE3	Q9Y6H6	103 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	OTOF	Q9HC10	1997 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	COL11A1	P12107	1806 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	APC	P25054	2843 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	COL1A2	P08123	1366 aa		2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	RAI1	Q7Z5J4	1906 aa	Predicted RBP	2.72	□□□□□ -1.97
VPS8-223	ENST00000485024	IGKV1D-13	A0A0B4J2D9	117 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024		A0A0G2JLM5	398 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024		A0A0J9YYE9	177 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	PRSS37	A4D1T9	235 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	NKX2-6	A6NCS4	301 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024		F6UB75	175 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	ZNF701	M0R085	212 aa	Predicted RBP	2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	SPOP	O43791	374 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	FKBP6	O75344	327 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	LSM8	O95777	96 aa	Known RBP	2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	TRBC1	P01850	177 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	BGLAP	P02818	100 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	SERPINE2	P07093	398 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	IGKV1-13	P0DP09	117 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	RAB3B	P20337	219 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	HOXA6	P31267	233 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	CAV2	P51636	162 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	DAOA	P59103	153 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	SP4	Q02446	784 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	HERPUD1	Q15011	391 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	OR7A5	Q15622	319 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	NKAIN1	Q4KMZ8	207 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	UBE2U	Q5VVX9	321 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	OR52W1	Q6IF63	320 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	ZNF544	Q6NX49	715 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	H3F3C	Q6NXT2	135 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	TEX43	Q6ZNM6	134 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	COX15	Q7KZN9	410 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	LINC00523	Q86TU6	105 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	THOC6	Q86W42	341 aa	Known RBP	2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	MYOCD	Q8IZQ8	938 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	C11orf42	Q8N5U0	333 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	ZNF321P	Q8N8H1	164 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	PRELID2	Q8N945	189 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	SUMF2	Q8NBJ7	301 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	HSD17B11	Q8NBQ5	300 aa		2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.71	□□□□□ -1.98
VPS8-223	ENST00000485024	NPB	Q8NG41	125 aa		2.71	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms