RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 ZNF806P0C7X5 589 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ANXA8P13928 327 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CXCL5P42830 114 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ATP5OP48047 213 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 NCBP2P52298 156 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MXD1Q05195 221 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 REG3AQ06141 175 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SPAG1Q07617 926 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ECH1Q13011 328 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SELENBP1Q13228 472 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MRPL23Q16540 153 aaKnown RBP3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ALKBH6Q3KRA9 238 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZBED5Q49AG3 693 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ANXA8L1Q5VT79 327 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SPECC1LQ69YQ0 1117 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 IGFL2Q6UWQ7 119 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 STRADAQ7RTN6 431 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 TMCO2Q7Z6W1 182 aaPredicted RBP3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 COMMD1Q8N668 190 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 Q8N9W7 124 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CCDC148Q8NFR7 591 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 OR10J6PQ8NGY7 276 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 PRORYQ9H606 182 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 HRASLS2Q9NWW9 162 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CLN8Q9UBY8 286 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZNF629Q9UEG4 869 aaPredicted RBP3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SLC17A4Q9Y2C5 497 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MROH7-TTC4A0A0A0MT08 1334 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 NFASCO94856 1347 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ATAD5Q96QE3 1844 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SPEF2Q9C093 1822 aa3.33□□□□□ -1.88
PTP4A1P3-201ENST00000433661 PLXNB3Q9ULL4 1909 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SCN2AQ99250 2005 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 IGHV3-66A0A0C4DH42 116 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 C5orf67F2Z3F1 127 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 HUS1O60921 280 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CA11O75493 328 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 AIFM1O95831 613 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CLIC3O95833 236 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SERPINA5P05154 406 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SERPINE2P07093 398 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ERCC1P07992 297 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ANXA5P08758 320 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MYL2P10916 166 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 NAMPTP43490 491 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 RPS10P46783 165 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MNAT1P51948 309 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZNF136P52737 540 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 DEFB103AP81534 67 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 SLC7A9P82251 487 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MECOMQ03112 1051 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 TWF1Q12792 350 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 PRPSAP1Q14558 356 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 RSPO1Q2MKA7 263 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 UBE2UQ5VVX9 321 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 TTC23LQ6PF05 361 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZNF493Q6ZR52 646 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 DUSP18Q8NEJ0 188 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CREB3L1Q96BA8 519 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 GALNT14Q96FL9 552 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 XPO6Q96QU8 1125 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 PAIP2Q9BPZ3 127 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CDC42EP4Q9H3Q1 356 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 LHX9Q9NQ69 397 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 C20orf96Q9NUD7 363 aaPredicted RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CCDC59Q9P031 241 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 KIAA1257Q9ULG3 409 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 WSB1Q9Y6I7 421 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 MYH13Q9UKX3 1938 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ASCC3Q8N3C0 2202 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 NBEAL2Q6ZNJ1 2754 aa3.32□□□□□ -1.88
PTP4A1P3-201ENST00000433661 TRAV25A0A0B4J276 109 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZNF816-ZNF321PA0A0X1KG74 233 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 A6NDN8 102 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CLDN11O75508 207 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 FGFR1OPO95684 399 aaKnown RBP3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 HOXA9P31269 272 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CDKN1BP46527 198 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 CLDN18P56856 261 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 HERVK_113P61574 105 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 NUTF2P61970 127 aaKnown RBP3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ACTA2P62736 377 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ACTG2P63267 376 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ACTC1P68032 377 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ACTA1P68133 377 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 OR7A5Q15622 319 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ZNF726P1Q15940 193 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 HSP90B2PQ58FF3 399 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 STUMQ69YW2 141 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 C16orf87Q6PH81 154 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 TMEM150AQ86TG1 271 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 PCP2Q8IVA1 136 aa3.31□□□□□ -1.88
PTP4A1P3-201ENST00000433661 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms