RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
TUBE1-202ENST00000368662 TRBV5-7A0A0A0MS05 114 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 NKX2-6A6NCS4 301 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 CLDN14O95500 239 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 ZNF35P13682 527 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 SRMP19623 302 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 RAD52P43351 418 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 SOX2P48431 317 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 FAM71F1Q96KD3 344 aaPredicted RBP10.65□□□□□ -0.7
TUBE1-202ENST00000368662 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 SNTG1Q9NSN8 517 aa10.65□□□□□ -0.7
TUBE1-202ENST00000368662 A0A1W2PPW3 197 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 M0R1B8 84 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 CASKO14936 926 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 CRYAAP02489 173 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 TGFBR1P36897 503 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 WNT5AP41221 380 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 ZNF83P51522 516 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 GLYATL3Q5SZD4 288 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 TMEM108Q6UXF1 575 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SERPINA12Q8IW75 414 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 ZNF101Q8IZC7 436 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 PAQR4Q8N4S7 273 aaPredicted RBP10.64□□□□□ -0.71
TUBE1-202ENST00000368662 PARP16Q8N5Y8 322 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 LYZL4Q96KX0 146 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 BCL2L14Q9BZR8 327 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 FOXJ3Q9UPW0 622 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 V9GYS6 101 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 CHD6Q8TD26 2715 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 IGHV2OR16-5A0A0B4J2B6 119 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 A0A1W2PPK0 400 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 H3BSH0 61 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SMPD2O60906 423 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 CDRT1O95170 752 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 ZNF20P17024 532 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 FSTP19883 344 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 ANOS1P23352 680 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SDC2P34741 201 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SOX6P35712 828 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 PEX19P40855 299 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 MAP2K3P46734 347 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 UCP2P55851 309 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 NAAAQ02083 359 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 FAM27D1Q5T7N8 215 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 OR5D14Q8NGL3 314 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 OR14K1Q8NGZ2 314 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 OR2AE1Q8NHA4 323 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 PTTG2Q9NZH5 202 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 NPAP1Q9NZP6 1156 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
TUBE1-202ENST00000368662 C5orf63A6NC05 138 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PDCD5O14737 125 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PIN1P1O15428 100 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ZG16O60844 167 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 NGFP01138 241 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PTAFRP25105 342 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 MAGEB1P43366 347 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ZNF92Q03936 586 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 GK2Q14410 553 aaPredicted RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 OR8B8Q15620 311 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 DGUOKQ16854 277 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ALKBH2Q6NS38 261 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 SEZ6L2Q6UXD5 910 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PGAP1Q75T13 922 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 MRPL21Q7Z2W9 205 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 CROCCP3Q8IVE0 287 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 FTMTQ8N4E7 242 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 DYNC2LI1Q8TCX1 351 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 DCUN1D5Q9BTE7 237 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 REPIN1Q9BWE0 567 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PPIL3Q9H2H8 161 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 STARD10Q9Y365 291 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ANKHD1Q8IWZ3 2542 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 EPXP11678 715 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ZNF182P17025 639 aaPredicted RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 RPS19P39019 145 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PSMD7P51665 324 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 FAM3AP98173 230 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 RIPPLY1Q0D2K3 151 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 ZBTB37Q5TC79 503 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 RFPL4BQ6ZWI9 263 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 PP6455Q8WZ26 134 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 SLC25A46Q96AG3 418 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 FGGYQ96C11 551 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 WFIKKN1Q96NZ8 548 aa10.63□□□□□ -0.71
TUBE1-202ENST00000368662 CCDC59Q9P031 241 aaKnown RBP10.63□□□□□ -0.71
TUBE1-202ENST00000368662 THBDP07204 575 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 RAB3BP20337 219 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 CD40P25942 277 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 THBS4P35443 961 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 GNALP38405 381 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 DDOSTP39656 456 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 GSK3AP49840 483 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 RORCP51449 518 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 PPP1CBP62140 327 aa10.62□□□□□ -0.71
TUBE1-202ENST00000368662 PPP3R1P63098 170 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms