RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Aldoart2A6ZI47 364 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm15114B1B0X6 433 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tm4sf19E9Q9H8 206 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 H2-M10.1O19443 331 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Stc2O88452 296 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sp1O89090 784 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Spp1P10923 294 aaKnown RBP8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 FaslgP41047 279 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pcbp4P57724 403 aaKnown RBP8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gng3P63216 75 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zfp235Q499D5 702 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pik3ip1Q7TMJ8 264 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Parp16Q7TMM8 322 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rap2aQ80ZJ1 183 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 PgghgQ8BP56 690 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 3830417A13RikQ8BQJ2 303 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ccdc90bQ8C3X2 256 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Serpina11Q8CIE0 424 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Znf668Q8K2R5 619 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Defb19Q8K3I8 83 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 GcaQ8VC88 220 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1495Q8VEZ4 319 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr156Q8VGA9 318 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1302Q8VGE9 315 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Loxl4Q924C6 757 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Sfxn5Q925N0 342 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gemin2Q9CQQ4 269 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tma16Q9CR02 221 aaKnown RBP8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pga5Q9D106 387 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tmbim7Q9D592 302 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Nkx2-4Q9EQM3 354 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Pcdh11xF6ZNL5 1338 aa8.04□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm13283A0A087WPG5 182 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ctxnd2A0A1B0GQX3 59 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr548-ps1A0A1B0GSG0 314 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ajap1A2ALI5 412 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1104A2AVB5 310 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm12789B1AUV7 164 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 A930017K11RikE0CXQ2 571 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 BC051665E9Q623 330 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tsga10ipF7A1F0 157 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Trav13d-3J3QMG8 112 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rhox2gL7MUB9 191 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Arg2O08691 354 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 P01671 111 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 P01725 110 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Icam1P13597 537 aaKnown RBP8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fcer2P20693 331 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cers1P27545 350 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rab2aP53994 212 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cks1bP61025 79 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Npas1P97459 594 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Emx2Q04744 253 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Trp53i11Q4QQM4 189 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr12Q60894 333 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ugt8Q64676 541 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1535Q7TQU0 326 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Hnrnpa3Q8BG05 379 aaKnown RBP8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Cept1Q8BGS7 416 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Q8BHG2 160 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 JkampQ8BI36 311 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ptges2Q8BWM0 384 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 PigmQ8C2R7 423 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Vps37cQ8R105 352 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 CmblQ8R1G2 245 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ndc1Q8VCB1 673 aaKnown RBP8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr551Q8VG23 315 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1238Q8VG59 315 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Commd4Q9CQ02 199 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tm7sf3Q9CRG1 565 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Prpsap1Q9D0M1 356 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr934Q9EQ87 310 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Carm1Q9WVG6 608 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm3409A0A0G2JE67 319 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ankrd60A2AMD2 318 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm14597A2CFG5 200 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fbxw25F7C9P2 466 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr1221L7MU53 311 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 SmcpP15265 143 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Selenbp1P17563 472 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Acp2P24638 423 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Dusp1P28563 367 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 SelenotP62342 195 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Hrh1P70174 488 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 IhhP97812 411 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Gm773Q3TML4 206 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr381Q5SSP0 311 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Selenbp2Q63836 472 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Zdhhc24Q6IR37 284 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fgl1Q71KU9 314 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fastkd3Q8BSN9 661 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Tssk5Q8C1R0 372 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 PigwQ8C398 503 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Ccm2lQ8VCC6 481 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Olfr350Q8VFP8 312 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Chchd6Q91VN4 273 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Marc1Q9CW42 340 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Rps19Q9CZX8 145 aaKnown RBP8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Fabp12Q9DAK4 132 aa8.03□□□□□ -1.12
Upf3b-201ENSMUST00000076265 Isg20Q9JL16 300 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms