RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 ATF1P18846 271 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 CCNOP22674 350 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 FOXF2Q12947 444 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 TBRG1Q3YBR2 411 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 HES5Q5TA89 166 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 BEND4Q6ZU67 534 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 PGAP1Q75T13 922 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 PRSS45Q7RTY3 260 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 NAA40Q86UY6 237 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 NKAIN3Q8N8D7 197 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 SAMD12Q8N8I0 201 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 RGCCQ9H4X1 137 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
GTF2F1-202ENST00000593678 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 LYZL6O75951 148 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 RAB3AP20336 220 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 CCL1P22362 96 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 IGHV1-2P23083 117 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 STOMP27105 288 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 APLNRP35414 380 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 LRRC28Q86X40 367 aaPredicted RBP13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 ZCCHC4Q9H5U6 513 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 ASF1BQ9NVP2 202 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 ZNF224Q9NZL3 707 aa13.01□□□□□ -0.33
GTF2F1-202ENST00000593678 ATMQ13315 3056 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 A0A1B0GTI1 187 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 C5orf49A4QMS7 147 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 MAGEB3O15480 346 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 TNFSF13O75888 250 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 DHRS3O75911 302 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 RSPO1Q2MKA7 263 aaPredicted RBP13□□□□□ -0.33
GTF2F1-202ENST00000593678 C3P1Q6ZMU1 363 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 BTLAQ7Z6A9 289 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 CPEB3Q8NE35 698 aaKnown RBP13□□□□□ -0.33
GTF2F1-202ENST00000593678 DNAAF1Q8NEP3 725 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 OR1J2Q8NGS2 313 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
GTF2F1-202ENST00000593678 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 LIN7BQ9HAP6 207 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 ZNF319Q9P2F9 582 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 SPTA1P02549 2419 aa13□□□□□ -0.33
GTF2F1-202ENST00000593678 XRCC2O43543 280 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 IGFBP3P17936 291 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 ADRA2CP18825 462 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 BDKRB2P30411 391 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 THBS2P35442 1172 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 RANBP1P43487 201 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 P2RY6Q15077 328 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 KRTAP27-1Q3LI81 207 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 CNIH2Q6PI25 160 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 JAGN1Q8N5M9 183 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 C1orf162Q8NEQ5 155 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 C10orf35Q96D05 121 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 STARD4Q96DR4 205 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 REEP6Q96HR9 211 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 MIXL1Q9H2W2 232 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 TMEM138Q9NPI0 162 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 STEAP1Q9UHE8 339 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 PAHP00439 452 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 CALCBP10092 127 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 MALLQ13021 153 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 MRPL49Q13405 166 aaKnown RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 IL18Q14116 193 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 RAB11BQ15907 218 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 SNAI3Q3KNW1 292 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 METAP1DQ6UB28 335 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 PLPP7Q8NBV4 271 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 OR1M1Q8NGA1 313 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 LGALS14Q8TCE9 139 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 ADAT3Q96EY9 351 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 GFI1Q99684 422 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 OPN3Q9H1Y3 402 aaPredicted RBP12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 EXTL2Q9UBQ6 330 aa12.99□□□□□ -0.33
GTF2F1-202ENST00000593678 MED19A0JLT2 244 aaPredicted RBP12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 A6NIN4 97 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 LMX1BO60663 402 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 TOXO94900 526 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 EDN3P14138 238 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 COX5AP20674 150 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 OPRM1P35372 400 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 DDOSTP39656 456 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 CAPZA1P52907 286 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 CASP6P55212 293 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 SCAND1P57086 179 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 GABRA6Q16445 453 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 TBC1D28Q2M2D7 210 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 PRR30Q53SZ7 412 aaPredicted RBP12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 UBE2NLQ5JXB2 153 aa12.98□□□□□ -0.33
GTF2F1-202ENST00000593678 MDP1Q86V88 176 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms