RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 RNF212BA8MTL3 300 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF878C9JN71 531 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SLC22A1O15245 554 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 CD5LO43866 347 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 GATBO75879 557 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 KRT33AO76009 404 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 GABARAPO95166 117 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ABHD16AO95870 558 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SERPINA3P01011 423 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 HLA-DQA2P01906 255 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 HLA-DPB1P04440 258 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ISG15P05161 165 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 GYPBP06028 91 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SOD3P08294 240 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 DANCRP0C864 163 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 FGF9P31371 208 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 PYCR1P32322 319 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 NTF4P34130 210 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ARR3P36575 388 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 OPRL1P41146 370 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ETV1P50549 477 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 RIDAP52758 137 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 GP2P55259 537 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ROR2Q01974 943 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF85Q03923 595 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 RAB39AQ14964 217 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF829Q3KNS6 432 aaPredicted RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SLC36A2Q495M3 483 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ARMCX4Q5H9R4 360 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 TSPO2Q5TGU0 170 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 DNM1P46Q6ZS02 220 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 LINC00299Q6ZSB3 139 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 DPY19L4Q7Z388 723 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 PHC2Q8IXK0 858 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 GABRG1Q8N1C3 465 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SLC22A24Q8N4F4 322 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 STEAP2Q8NFT2 490 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 OR6N2Q8NGY6 317 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 OR2AJ1Q8NGZ0 328 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ZNRF4Q8WWF5 429 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 C11orf40Q8WZ69 217 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 UFD1Q92890 307 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 S100PBPQ96BU1 408 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SMIM19Q96E16 107 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 YIPF6Q96EC8 236 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 TRMT61AQ96FX7 289 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 DCLRE1CQ96SD1 692 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 ABHD6Q9BV23 337 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 REG4Q9BYZ8 158 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 RBM38Q9H0Z9 239 aaKnown RBP5.71□□□□□ -1.5
CDCA3-209ENST00000544610 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 SLC7A10Q9NS82 523 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 RNF115Q9Y4L5 304 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 TIMM10BQ9Y5J6 103 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 HIVEP2P31629 2446 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 JMJD1CQ15652 2540 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 IGKV1D-43A0A0B4J1Z2 117 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 OR6C6A6NF89 314 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 H7C1C5 153 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 TMPRSS2O15393 492 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 NOL3O60936 208 aaKnown RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 UPK3AO75631 287 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 INMTO95050 263 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 UBL3O95164 117 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 IFNA2P01563 188 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 IGHV4-39P01824 125 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF12P17014 697 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 MAPK3P27361 379 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 PSMB9P28065 219 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 MAP2K3P46734 347 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 LCN6P62502 163 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 TUBA1BP68363 451 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 FMODQ06828 376 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 ENDOGQ14249 297 aaKnown RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 CDK5R1Q15078 307 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 RAB35Q15286 201 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 MED22Q15528 200 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 NEDD8Q15843 81 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 CEACAM16Q2WEN9 425 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 KRTAP27-1Q3LI81 207 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 ZNF672Q499Z4 452 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 YIF1BQ5BJH7 314 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 NCMAPQ5T1S8 102 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 LIPNQ5VXI9 398 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 DMKNQ6E0U4 476 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 DRAM2Q6UX65 266 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 SEZ6L2Q6UXD5 910 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 UNQ6126/PRO20091Q6UXV3 157 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 Q6ZSR3 168 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 TUBA1AQ71U36 451 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 DCXRQ7Z4W1 244 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 LHFPL3Q86UP9 236 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 IL17RDQ8NFM7 739 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 OR52H1Q8NGJ2 320 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 SMAP2Q8WU79 429 aaPredicted RBP5.7□□□□□ -1.5
CDCA3-209ENST00000544610 SGCDQ92629 289 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 C10orf35Q96D05 121 aa5.7□□□□□ -1.5
CDCA3-209ENST00000544610 DNAJA3Q96EY1 480 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms