RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ANKRD26P1Q6NSI1 321 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 RWDD4Q6NW29 188 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 C3orf33Q6P1S2 294 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 RNASEKQ6P5S7 137 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 DHRS4L2Q6PKH6 230 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 TRMT10CQ7L0Y3 403 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 NIPA1Q7RTP0 329 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 SYCE1Q8N0S2 351 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 PDIK1LQ8N165 341 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 TCAIMQ8N3R3 496 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 MS4A15Q8N5U1 240 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 CSGALNACT2Q8N6G5 542 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 B3GNT7Q8NFL0 401 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 OR10R2Q8NGX6 335 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 PDCD6IPQ8WUM4 868 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 TMIGD2Q96BF3 282 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 DGCR14Q96DF8 476 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 ZNF578Q96N58 590 aaPredicted RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 SLC25A2Q9BXI2 301 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 RSPO3Q9BXY4 272 aaPredicted RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 METTL7AQ9H8H3 244 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 ISYNA1Q9NPH2 558 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 PSMC3IPQ9P2W1 217 aaPredicted RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 STX18Q9P2W9 335 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 ING4Q9UNL4 249 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 PSG8Q9UQ74 426 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 GINS2Q9Y248 185 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 SAMHD1Q9Y3Z3 626 aaKnown RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 RIMS2Q9UQ26 1411 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 POLR3AO14802 1390 aaPredicted RBP2.98□□□□□ -1.93
SKP1-208ENST00000521216 NUP155O75694 1391 aa2.98□□□□□ -1.93
SKP1-208ENST00000521216 ERCC6Q03468 1493 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 SHANK2Q9UPX8 1470 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 DNMBPQ6XZF7 1577 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 HFM1A2PYH4 1435 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 NCOA1Q15788 1441 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 IGHV3-74A0A0B4J1X5 117 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ZNF816-ZNF321PA0A0X1KG74 233 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ZNF233A6NK53 670 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ACOX3O15254 700 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 CACNG3O60359 315 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 CDH16O75309 829 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 CDK14O94921 469 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 SEMA3DO95025 777 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 LYPLA2O95372 231 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 DEXIO95424 95 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 OTCP00480 354 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 HLA-DPB1P04440 258 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ADRA2AP08913 450 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 OR1G1P47890 313 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 EIF2B2P49770 351 aaKnown RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 ACTR3P61158 418 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 YWHAEP62258 255 aaKnown RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 PMS2P3Q13401 168 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 RGNQ15493 299 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 CHRNA6Q15825 494 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 SSX2Q16385 188 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 VPS26BQ4G0F5 336 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 C5orf47Q569G3 176 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 TMEM31Q5JXX7 168 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ANKRD22Q5VYY1 191 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 FBXW9Q5XUX1 488 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 TEX43Q6ZNM6 134 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 BIVMQ86UB2 503 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 RIMKLAQ8IXN7 391 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 PRSS58Q8IYP2 241 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ZNF321PQ8N8H1 164 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 TTC29Q8NA56 475 aaPredicted RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 SPATA4Q8NEY3 305 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 SLC7A13Q8TCU3 470 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 LKAAEAR1Q8TD35 194 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 NAT14Q8WUY8 206 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 CREB3L1Q96BA8 519 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 RBMXL1Q96E39 390 aaKnown RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 CCDC126Q96EE4 140 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 BIRC8Q96P09 236 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 SERPINB12Q96P63 405 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 XPO6Q96QU8 1125 aaKnown RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 ATP5SQ99766 215 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 C19orf12Q9NSK7 152 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ETNK2Q9NVF9 386 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ENOPH1Q9UHY7 261 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 LSM7Q9UK45 103 aaKnown RBP2.97□□□□□ -1.93
SKP1-208ENST00000521216 GOLT1BQ9Y3E0 138 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 LMTK2Q8IWU2 1503 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 ADCY9O60503 1353 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 AKAP12Q02952 1782 aa2.97□□□□□ -1.93
SKP1-208ENST00000521216 NRCAMQ92823 1304 aa2.96□□□□□ -1.93
SKP1-208ENST00000521216 IGSF9BQ9UPX0 1349 aa2.96□□□□□ -1.93
SKP1-208ENST00000521216 FMN1Q68DA7 1419 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 A0A0U1RQS6 177 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 LOC100506127A0A0U1RQW1 187 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 GSTTP1A0A1W2PQM5 241 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 FAM47DPA6NHR8 397 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ZNF98A6NK75 572 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 EVPLLA8MZ36 301 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 ATP6V1G2-DDX39BF2Z307 99 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 H7C0C1 242 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 CDC7O00311 574 aa2.96□□□□□ -1.94
SKP1-208ENST00000521216 TOR1AO14656 332 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms