RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 SAR1BQ9Y6B6 198 aa1.3□□□□□ -2.2
VPS26A-208ENST00000497022 BRCA1P38398 1863 aaKnown RBP1.3□□□□□ -2.2
VPS26A-208ENST00000497022 A0A0U1RQV1 116 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 A0A1W2PRD5 423 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TMEM120BA0PK00 339 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ERICH4A6NGS2 130 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 K7EMT4 169 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF701M0R085 212 aaPredicted RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 NUPL2O15504 423 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 RAD51CO43502 376 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SPOPO43791 374 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 FKBP6O75344 327 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 AQP8O94778 261 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 YIF1AO95070 293 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SCELO95171 688 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 UTS2O95399 124 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CD160O95971 181 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CSTAP01040 98 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 HLA-DQA1P01909 254 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 HBE1P02100 147 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ARG1P05089 322 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF250P15622 560 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CTRB1P17538 263 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 U2AF2P26368 475 aaKnown RBP eCLIP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 OR1E1P30953 314 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 HRH1P35367 487 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 NUP62P37198 522 aaPredicted RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CXCL12P48061 93 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 UBE2MP61081 183 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TMED1Q13445 227 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CLINT1Q14677 625 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 NCF4Q15080 339 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 OR7A5Q15622 319 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SMUG1Q53HV7 270 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SAXO2Q658L1 398 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SPECC1LQ69YQ0 1117 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 H3F3CQ6NXT2 135 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ZFP1Q6P2D0 407 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ULK3Q6PHR2 472 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TMEM150AQ86TG1 271 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CALHM1Q8IU99 346 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CMTM8Q8IZV2 173 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 PDCL2Q8N4E4 241 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 LRRC52Q8N7C0 313 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 INO80EQ8NBZ0 244 aaPredicted RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 OR8U1Q8NH10 309 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TVP23CQ96ET8 276 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 CFAP53Q96M91 514 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SERPINB12Q96P63 405 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 SLC25A2Q9BXI2 301 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ZYG11BQ9C0D3 744 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 PARP12Q9H0J9 701 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 OR2AG1Q9H205 316 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 LHX5Q9H2C1 402 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 PIGUQ9H490 435 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 FBXO44Q9H4M3 255 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TMEM38AQ9H6F2 299 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 RPF2Q9H7B2 306 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 BEX1Q9HBH7 125 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 LZTFL1Q9NQ48 299 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 AGPAT4Q9NRZ5 378 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF230Q9UIE0 474 aaPredicted RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 RCL1Q9Y2P8 373 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 MRPS18BQ9Y676 258 aaKnown RBP1.29□□□□□ -2.2
VPS26A-208ENST00000497022 KCNE3Q9Y6H6 103 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TNIKQ9UKE5 1360 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 TMEM131Q92545 1883 aa1.29□□□□□ -2.2
VPS26A-208ENST00000497022 A0A0J9YYE9 177 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 A0A1B0GUH1 482 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 A0A1W2PPV4 95 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF99A8MXY4 864 aaPredicted RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 SMKR1H3BMG3 65 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 H7C0C1 242 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 DNASE2O00115 360 aaPredicted RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 BPY2O14599 106 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 SLC9A3R1O14745 358 aaPredicted RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ZBTB5O15062 677 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CHMP2AO43633 222 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 LSM8O95777 96 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TGM6O95932 706 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TRBC1P01850 177 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MBP02144 154 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CD74P04233 296 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 S100A9P06702 114 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 KRT16P08779 473 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TPM1P09493 284 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 CLTAP09496 248 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 STAG3L2P0CL84 134 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 MAS1LP35410 378 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TGFBR1P36897 503 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 GPX4P36969 197 aaPredicted RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 NBL1P41271 181 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ETV1P50549 477 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 RPS15AP62244 130 aaKnown RBP1.28□□□□□ -2.2
VPS26A-208ENST00000497022 LCN2P80188 198 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 ZNF33AQ06730 810 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 TCP10Q12799 353 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 IL15RAQ13261 267 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 GABRA6Q16445 453 aa1.28□□□□□ -2.2
VPS26A-208ENST00000497022 RPEL1Q2QD12 228 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms