RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 LCN6P62502 163 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 ECH1Q13011 328 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 GK2Q14410 553 aaPredicted RBP11□□□□□ -0.65
EXOSC3-207ENST00000490516 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 GCNT6Q5T4J0 391 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 OR4D11Q8NGI4 311 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 SEH1LQ96EE3 360 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 MPP4Q96JB8 637 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 PRSS27Q9BQR3 290 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
EXOSC3-207ENST00000490516 TCF19Q9Y242 345 aa11□□□□□ -0.65
EXOSC3-207ENST00000490516 TRAPPC13A5PLN9 417 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 A6NDX4 124 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 A6NLC8 198 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 M0R1W7 72 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 RER1O15258 196 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 MT-ND1P03886 318 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 CHATP28329 748 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 RPL14P50914 215 aaKnown RBP10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 AQP6Q13520 282 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 PCK2Q16822 640 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 COLCA1Q6ZS62 124 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 CENPVQ7Z7K6 275 aaPredicted RBP10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 FNDC8Q8TC99 324 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 LRRC8CQ8TDW0 803 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 ACOT11Q8WXI4 607 aaPredicted RBP10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 ADAT1Q9BUB4 502 aaKnown RBP10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 RMND5AQ9H871 391 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 EVA1AQ9H8M9 152 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 HIF3AQ9Y2N7 669 aa10.99□□□□□ -0.65
EXOSC3-207ENST00000490516 NKX6-3A6NJ46 265 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 F2RL2O00254 374 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SERPINB7O75635 380 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 IGF2P01344 180 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 HOXB9P17482 250 aaPredicted RBP10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 AMY2BP19961 511 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SCARB2Q14108 478 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 DUSP7Q16829 419 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 MICBQ29980 383 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SLC36A1Q7Z2H8 476 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 DYNAPQ8N1N2 210 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 GPR32P1Q8NGA4 272 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SPRYD4Q8WW59 207 aaPredicted RBP10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SLCO4A1Q96BD0 722 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 SGTBQ96EQ0 304 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 DUS3LQ96G46 650 aaKnown RBP10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 ZMAT5Q9UDW3 170 aaKnown RBP10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 AURKCQ9UQB9 309 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 NDUFAF1Q9Y375 327 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 RAP2CQ9Y3L5 183 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 FRAS1Q86XX4 4008 aa10.98□□□□□ -0.65
EXOSC3-207ENST00000490516 RYR1P21817 5038 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 A0A1W2PQ09 198 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 SDHDO14521 159 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 RAMP3O60896 148 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 TFF1P04155 84 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 TGM4P49221 684 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 ABCE1P61221 599 aaKnown RBP10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 IL5RAQ01344 420 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 BLMHQ13867 455 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 LRRC10Q5BKY1 277 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 RABL3Q5HYI8 236 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 SLC2A7Q6PXP3 512 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 LHFPL4Q7Z7J7 247 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 NKAIN4Q8IVV8 208 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 TMEM255BQ8WV15 326 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 SORT1Q99523 831 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 ZNF649Q9BS31 505 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 SLC25A37Q9NYZ2 338 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 ADA2Q9NZK5 511 aa10.97□□□□□ -0.65
EXOSC3-207ENST00000490516 VGLL3A8MV65 326 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 H0YAE9 185 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 GMDSO60547 372 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 ALDOBP05062 364 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 MUC1P15941 1255 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 PAICSP22234 425 aaKnown RBP10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 GSK3BP49841 420 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 CTXN1P60606 82 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 PGAP1Q75T13 922 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 MSRB3Q8IXL7 192 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 OR5T2Q8NGG2 359 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 OR9I1Q8NGQ6 314 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 LRRC29Q8WV35 223 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 CITED4Q96RK1 184 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 MYLK2Q9H1R3 596 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 WDR55Q9H6Y2 383 aaPredicted RBP10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 GRPEL1Q9HAV7 217 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 PNPOQ9NVS9 261 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 ATPIF1Q9UII2 106 aa10.96□□□□□ -0.65
EXOSC3-207ENST00000490516 POU1F1P28069 291 aa10.95□□□□□ -0.66
EXOSC3-207ENST00000490516 THBS3P49746 956 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms