RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ARPC4-TTLL3A0A0A6YYG9 625 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 CIB4A0PJX0 185 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF503-AS2A6NEH8 195 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ACOD1A6NK06 481 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 F5H5K5 113 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 RAD51DO75771 328 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 LYZL6O75951 148 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 CDRT1O95170 752 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 HLA-HP01893 362 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ANXA2P07355 339 aaKnown RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 DBHP09172 617 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 UCHL1P09936 223 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 OCM2P0CE71 109 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 CD79AP11912 226 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 MAPK3P27361 379 aaPredicted RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 CALRP27797 417 aaKnown RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 SDC2P34741 201 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 OPRM1P35372 400 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ARR3P36575 388 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 MTNR1BP49286 362 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 TPTEP56180 551 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 KRTAP10-9P60411 292 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 GALK2Q01415 458 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 GABRA6Q16445 453 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ODF4Q2M2E3 257 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 PABPC1L2AQ5JQF8 200 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 FAM27D1Q5T7N8 215 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 TMEM244Q5VVB8 128 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 DRAM2Q6UX65 266 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 UNQ9370/PRO34162Q6UXP9 181 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 BEND4Q6ZU67 534 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 NCCRP1Q6ZVX7 275 aaPredicted RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF433Q8N7K0 673 aaPredicted RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 ZNF610Q8N9Z0 462 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 OR10AC1Q8NH08 325 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 LILRB4Q8NHJ6 448 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 TSEN15Q8WW01 171 aaKnown RBP9.81□□□□□ -0.84
LINC00539-203ENST00000434601 SLC7A6Q92536 515 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 RND1Q92730 232 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 PPP1R14AQ96A00 147 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 DERL3Q96Q80 235 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 TSC22D3Q99576 134 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 NOX3Q9HBY0 568 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 KCNJ16Q9NPI9 418 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 SLC17A5Q9NRA2 495 aa9.81□□□□□ -0.84
LINC00539-203ENST00000434601 NAV3Q8IVL0 2385 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 A0A0G2JNJ9 132 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 LOC107986453A0A1B0GWG9 222 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 P2RY10O00398 339 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 CASKO14936 926 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 TTRP02766 147 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 ACSM4P0C7M7 580 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 COX5BP10606 129 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SLC2A1P11166 492 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 IGFBP2P18065 325 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 HOXC12P31275 282 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SOX6P35712 828 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SLC6A9P48067 706 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SOX2P48431 317 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 UBE2NP61088 152 aaKnown RBP9.8□□□□□ -0.84
LINC00539-203ENST00000434601 PMPCAQ10713 525 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 P2RY6Q15077 328 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 HSD17B12Q53GQ0 312 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SFRP5Q5T4F7 317 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 FAM57BQ71RH2 274 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 PRSS45Q7RTY3 260 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 CXorf67Q86X51 503 aaPredicted RBP9.8□□□□□ -0.84
LINC00539-203ENST00000434601 CCDC36Q8IYA8 594 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 RDH10Q8IZV5 341 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 OR51A4Q8NGJ6 313 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 PGAM5Q96HS1 289 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 BOD1Q96IK1 185 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 KCNS3Q9BQ31 491 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SLIRPQ9GZT3 109 aaKnown RBP9.8□□□□□ -0.84
LINC00539-203ENST00000434601 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
LINC00539-203ENST00000434601 PIGMQ9H3S5 423 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 NOX4Q9NPH5 578 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 SNTG1Q9NSN8 517 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 Q9UFV3 132 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 HHLA2Q9UM44 414 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 DHDHQ9UQ10 334 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 N6AMT1Q9Y5N5 214 aa9.8□□□□□ -0.84
LINC00539-203ENST00000434601 TRBV5-7A0A0A0MS05 114 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 A0A1B0GVI7 797 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 A0A1W2PPK0 400 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 SHISA3A0PJX4 238 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 H3BSH0 61 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 MSTNO14793 375 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 PIN1P1O15428 100 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 SYT7O43581 403 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 RAF1P04049 648 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 CLEC2LP0C7M8 214 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
LINC00539-203ENST00000434601 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
LINC00539-203ENST00000434601 MAGEB1P43366 347 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 RAB1AP62820 205 aa9.79□□□□□ -0.84
LINC00539-203ENST00000434601 HGFACQ04756 655 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms