RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SLC35F2Q8IXU6 374 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF511Q8NB15 262 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 OR5M1Q8NGP8 315 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF519Q8TB69 540 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ZPBPQ9BS86 351 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 ALG12Q9BV10 488 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 GRHPRQ9UBQ7 328 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 MSRB2Q9Y3D2 182 aa11.63□□□□□ -0.55
CPNE1-201ENST00000317677 FREM2Q5SZK8 3169 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 UBE2QL1A1L167 161 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 GABARAPH6UMI1 98 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 J3QLW9 94 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 CD63P08962 238 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 HLA-DOBP13765 273 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF19P17023 458 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 RCC1P18754 421 aaPredicted RBP11.62□□□□□ -0.55
CPNE1-201ENST00000317677 SPINK2P20155 84 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 MSX1P28360 303 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
CPNE1-201ENST00000317677 HTR5AP47898 357 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 MLF1P58340 268 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 SLC3A1Q07837 685 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF345Q14585 488 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 ACKR1Q16570 336 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 EMC4Q5J8M3 183 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 HES3Q5TGS1 186 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 SSX9Q7RTT3 188 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 SLC36A1Q7Z2H8 476 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 KDM8Q8N371 416 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 KCNRGQ8N5I3 272 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 POMGNT2Q8NAT1 580 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 OR6K6Q8NGW6 343 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 RNF166Q96A37 237 aaPredicted RBP11.62□□□□□ -0.55
CPNE1-201ENST00000317677 FARSAQ9Y285 508 aaKnown RBP11.62□□□□□ -0.55
CPNE1-201ENST00000317677 KLHDC2Q9Y2U9 406 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 DOCK10Q96BY6 2186 aa11.62□□□□□ -0.55
CPNE1-201ENST00000317677 MED12Q93074 2177 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 CCDC187A0A096LP49 1063 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 TRAV1-2A0A0B4J238 106 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MS4A18H0YCH9 400 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 FGF16O43320 207 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 GPANK1O95872 356 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 IGHEP01854 428 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2T7P0C7T2 308 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 ACTC1P68032 377 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 ACTA1P68133 377 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MS4A18Q3C1V0 323 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2W3Q7Z3T1 314 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 RPS19BP1Q86WX3 136 aaKnown RBP11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2T27Q8NH04 317 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 TLNRD1Q9H1K6 362 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 SRA1Q9HD15 236 aaKnown RBP11.61□□□□□ -0.55
CPNE1-201ENST00000317677 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 ST6GALNAC2Q9UJ37 374 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 PCDHB10Q9UN67 800 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 RCE1Q9Y256 329 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 KNTC1P50748 2209 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 PTPRBP23467 1997 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 IGF2RP11717 2491 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 NCKAP5O14513 1909 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR14I1A6ND48 311 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF208O43345 1280 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM127O75204 238 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2F2O95006 317 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 IGHMP01871 453 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MT-ND5P03915 603 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 NPBWR1P48145 328 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR10A3P58181 314 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MRPS10P82664 201 aaKnown RBP11.61□□□□□ -0.55
CPNE1-201ENST00000317677 FABP9Q0Z7S8 132 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2F1Q13607 317 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR7A5Q15622 319 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OPN5Q6U736 354 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MFSD8Q8NHS3 518 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 PELI1Q96FA3 418 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 MRGPRX4Q96LA9 322 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 PGLYRP3Q96LB9 341 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 TMEM138Q9NPI0 162 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 KLK13Q9UKR3 277 aa11.61□□□□□ -0.55
CPNE1-201ENST00000317677 A0A1B0GV90 55 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 ANKRD20A5PA0PJZ0 165 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 TVP23AA6NH52 213 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 G3V3Y1 287 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 H3BML4 177 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 PLPP2O43688 288 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 OR2T1O43869 369 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 OPN1LWP04000 364 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 ACVR1BP36896 505 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 SSR4P51571 173 aa11.6□□□□□ -0.55
CPNE1-201ENST00000317677 ZNF41P51814 821 aaPredicted RBP11.6□□□□□ -0.55
CPNE1-201ENST00000317677 RPL27P61353 136 aaKnown RBP11.6□□□□□ -0.55
CPNE1-201ENST00000317677 CHAF1BQ13112 559 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms