RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 AHSA1O95433 338 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CSTBP04080 98 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC2A2P11168 524 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 PSMB9P28065 219 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 LCN1P31025 176 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 P2RX1P51575 399 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 IL15RAQ13261 267 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 DNASE1L3Q13609 305 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GAPTQ8N292 157 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 OR1J2Q8NGS2 313 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 SPATA3Q8NHX4 192 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GNPDA2Q8TDQ7 276 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 UFD1Q92890 307 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 EXTL1Q92935 676 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 ZMYND19Q96E35 227 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 MNTQ99583 582 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CMKLR1Q99788 373 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 SHARPINQ9H0F6 387 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RNF24Q9Y225 148 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RBM7Q9Y580 266 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 IER3IP1Q9Y5U9 82 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 HSPE1-MOB4S4R3N1 261 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 FUOMA2VDF0 154 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 H0YL77 283 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RAB36O95755 333 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 PTBP3O95758 552 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 HPP00738 406 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 UCHL1P09936 223 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 UBL4AP11441 157 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 PGCP20142 388 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 FBLP22087 321 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 SUPT4H1P63272 117 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 XKRXQ6PP77 449 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 ZCCHC24Q8N2G6 241 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 POC5Q8NA72 575 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GPR151Q8TDV0 419 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GIPC3Q8TF64 312 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 OSTF1Q92882 214 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 VRK1Q99986 396 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 PLGRKTQ9HBL7 147 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 ABCB9Q9NP78 766 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 IFT46Q9NQC8 304 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 MGAT4BQ9UQ53 548 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 FARSAQ9Y285 508 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CENPBD1B2RD01 187 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CCRL2O00421 344 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CDC40O60508 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CPN1P15169 458 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CFL1P23528 166 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 AGTR1P30556 359 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CHRNB4P30926 498 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GLP1RP43220 463 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 HSF2Q03933 536 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RIN1Q13671 783 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC35D2Q76EJ3 337 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CATSPERDQ86XM0 798 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 MEIOBQ8N635 442 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 NEK7Q8TDX7 302 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RBP7Q96R05 134 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RDH8Q9NYR8 311 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RARRES3Q9UL19 164 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 POLR1CO15160 346 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 EIF4EP06730 217 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 ATXN8OSP0DMR3 200 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 IFNGR1P15260 489 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RFX3P48380 749 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TUBA1BP68363 451 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TUBA4AP68366 448 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GALEQ14376 348 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 DTX3Q8N9I9 347 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 RNF133Q8WVZ7 376 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TSEN15Q8WW01 171 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 DDIT4LQ96D03 193 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GFM1Q96RP9 751 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 POU2F3Q9UKI9 436 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TVP23AA6NH52 213 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 DEFB108AA8MXU0 73 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC19A2O60779 497 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 RBMXL2O75526 392 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 FOXH1O75593 365 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 IFNA21P01568 189 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 H1F0P07305 194 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SP1P08047 785 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SDHAP31040 664 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 MTFR2Q6P444 385 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 OR8H2Q8N162 312 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 OR4K13Q8NH42 304 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 NICN1Q9BSH3 213 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SRRQ9GZT4 340 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SOX21Q9Y651 276 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CDH10Q9Y6N8 788 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 MUC2Q02817 5179 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms