RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 TOMM34Q15785 309 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 EIF2S3LQ2VIR3 472 aaKnown RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 DNM1P34Q6PK57 102 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 KDF1Q8NAX2 398 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 PATE1Q8WXA2 126 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SULT4A1Q9BR01 284 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 OR2S2Q9NQN1 319 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 PCDHGA1Q9Y5H4 931 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 FLVCR1Q9Y5Y0 555 aa13.22□□□□□ -0.29
CACNA1A-220ENST00000635988 KIR2DS5A0A0G2JLQ3 304 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 A0A0G2JNG1 304 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MSGN1A6NI15 193 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 KIR2DS3K7RE56 304 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 HCRTR2O43614 444 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MED6O75586 246 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 NSA2O95478 260 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 FCGR3AP08637 254 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 GSTP1P09211 210 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 VSIG8P0DPA2 414 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 GNB3P16520 340 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 ADH6P28332 368 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 KIR2DL1P43626 348 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 SULT1A2P50226 295 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 DVL1P1P54792 670 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 KIR2DS5Q14953 304 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MARCH3Q86UD3 253 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 KDM8Q8N371 416 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 C2orf50Q96LR7 162 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 TAF9BQ9HBM6 251 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 SLC22A11Q9NSA0 550 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 COA3Q9Y2R0 106 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 LINC00587B1AMM8 73 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 SSX5O60225 188 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MT-ND4LP03901 98 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 GP1BBP13224 206 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 PGCP20142 388 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 HNRNPA2B1P22626 353 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 NTSR1P30989 418 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 F2RL1P55085 397 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 ZNF117Q03924 483 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 CLEC18BQ6UXF7 455 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 TMPPEQ6ZT21 453 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 C19orf47Q8N9M1 422 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 FGGYQ96C11 551 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.29
CACNA1A-220ENST00000635988 MYO7AQ13402 2215 aa13.21□□□□□ -0.3
CACNA1A-220ENST00000635988 C17orf105B2RV13 164 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 CTSBP07858 339 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 FPR2P25090 351 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 GNALP38405 381 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 MMP16P51512 607 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 PPP1CAP62136 330 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 YPEL5P62699 121 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 ZP2Q05996 745 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 GPM6BQ13491 265 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 ELAVL1Q15717 326 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 FAM189A2Q15884 450 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 COL13A1Q5TAT6 717 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 BTNL8Q6UX41 500 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 NXF5Q9H1B4 397 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 C5orf66Q9H5L9 145 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 GSN-AS1Q9NRJ2 163 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 TIMM10BQ9Y5J6 103 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 CACNA1CQ13936 2221 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 A6NIZ1 184 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 P2RY10O00398 339 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 YKT6O15498 198 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 LRP3O75074 770 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 PMELP40967 661 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 LPAR6P43657 344 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 RAP1BP61224 184 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 RAP1AP62834 184 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 PCK2Q16822 640 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 DCXRQ7Z4W1 244 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 OR52N4Q8NGI2 321 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 METTL8Q9H825 291 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 TUBA4BQ9H853 241 aa13.2□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM14DPA8MWL7 114 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 LMX1BO60663 402 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 CST4P01036 141 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 H2BFMP0C1H6 154 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 S100PP25815 95 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 CD80P33681 288 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms