RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 IGLV3-9A0A075B6K5 115 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 TRAV27A0A087WT01 109 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 BHLHE40O14503 412 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 AIREO43918 545 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 HPXP02790 462 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 ASAH2BP0C7U1 165 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF84P51523 738 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 KLF3P57682 345 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-214ENST00000560402 RPS7P62081 194 aaKnown RBP11.61□□□□□ -0.55
SMAD3-214ENST00000560402 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-214ENST00000560402 MELKQ14680 651 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 NKPD1Q17RQ9 610 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 TBC1D28Q2M2D7 210 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 PCGF3Q3KNV8 242 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 SLC36A2Q495M3 483 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 AADACL4Q5VUY2 407 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 TMPRSS11AQ6ZMR5 421 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 SKA3Q8IX90 412 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 NOXO1Q8NFA2 376 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 OR1J2Q8NGS2 313 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 OR51F2Q8NH61 342 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 TMEM186Q96B77 213 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 LGALS12Q96DT0 336 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 BCL2L14Q9BZR8 327 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 ISYNA1Q9NPH2 558 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF275Q9NSD4 429 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-214ENST00000560402 SLCO1C1Q9NYB5 712 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 NKIRAS2Q9NYR9 191 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 TAS2R5Q9NYW4 299 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 MYEF2Q9P2K5 600 aaKnown RBP11.61□□□□□ -0.55
SMAD3-214ENST00000560402 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
SMAD3-214ENST00000560402 MCIDASD6RGH6 385 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 PTP4A3O75365 173 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 RP2O75695 350 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 NCR1O76036 304 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 PPP1R3DO95685 299 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 MSMBP08118 114 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 TSPAN19P0C672 248 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 NR2C1P13056 603 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF250P15622 560 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 RGS6P49758 472 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 DAP3P51398 398 aaKnown RBP11.6□□□□□ -0.55
SMAD3-214ENST00000560402 WNT4P56705 351 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 CLRN1P58418 232 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ACTC1P68032 377 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ACTA1P68133 377 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
SMAD3-214ENST00000560402 PLBD1Q6P4A8 553 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 LINC00299Q6ZSB3 139 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 SLC16A12Q6ZSM3 486 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 USP43Q70EL4 1123 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 MEPCEQ7L2J0 689 aaKnown RBP11.6□□□□□ -0.55
SMAD3-214ENST00000560402 SLC16A14Q7RTX9 510 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 LRP11Q86VZ4 500 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 CPOQ8IVL8 374 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 KLHL36Q8N4N3 616 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 NANOGP1Q8N7R0 232 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF519Q8TB69 540 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 LIPHQ8WWY8 451 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 ERMAPQ96PL5 475 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-214ENST00000560402 NAA50Q9GZZ1 169 aaKnown RBP11.6□□□□□ -0.55
SMAD3-214ENST00000560402 RNF121Q9H920 327 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 DUSP13Q9UII6 198 aa11.6□□□□□ -0.55
SMAD3-214ENST00000560402 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 TRAV20A0A0B4J274 112 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 A0A1W2PRG6 482 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 NPIPB13A6NJU9 1138 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 C17orf100A8MU93 164 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 NPIPB4C9JG80 1138 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 IMPA2O14732 288 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 ARPC3O15145 178 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 MT-ND5P03915 603 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 SCG5P05408 212 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 QDPRP09417 244 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 GAAP10253 952 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 PSMA1P25786 263 aaKnown RBP11.59□□□□□ -0.55
SMAD3-214ENST00000560402 RAD52P43351 418 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 PLP2Q04941 152 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 CTF1Q16619 201 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 MOGQ16653 247 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 HIST3H3Q16695 136 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
SMAD3-214ENST00000560402 FAM209AQ5JX71 171 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 LRFN4Q6PJG9 635 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 JAZF1Q86VZ6 243 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 SYNPRQ8TBG9 265 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 YIPF5Q969M3 257 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
SMAD3-214ENST00000560402 SH3GL3Q99963 347 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 JAM3Q9BX67 310 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 HINT3Q9NQE9 182 aaKnown RBP11.59□□□□□ -0.55
SMAD3-214ENST00000560402 HIF1ANQ9NWT6 349 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 TAAR3PQ9P1P4 343 aa11.59□□□□□ -0.55
SMAD3-214ENST00000560402 IL20RAQ9UHF4 553 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms